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"Tools or methods for generating graphs from structured data" matching MCP servers:

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    Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.
    Apache 2.0
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    An MCP server that exposes any REST API to LLMs through runtime discovery, providing tools to browse endpoints, fetch schemas, and apply business rules without hardcoding or schema duplication.
    MIT
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    Enables users to expose arbitrary HTTP APIs as configurable MCP tools by defining tool specifications in a JSON configuration file.
    2,868
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    An MCP server and CLI tool that transforms codebases into AI-ready context through semantic search, call graph analysis, and incremental indexing. It enables AI assistants to perform hybrid vector and keyword searches to understand complex repository structures and cross-file relationships.
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    MIT
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    Connect any AI to PostgreSQL, MySQL, or SQL Server — 24 dialect-aware tools for query, schema, optimization, and more.
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    MIT
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    MCP server that allows Claude AI to interact directly with MySQL databases, enabling query execution and table information retrieval through natural language.
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    MIT
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    Enables high-precision detection, anonymization, encryption and decryption of personally identifiable information (PII) in text using GPT-4o-based detection and advanced cryptographic methods. Supports both deterministic encryption for searchable data and format-preserving encryption for structured identifiers.
    8
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    Provides deterministic tools for transforming, formatting, and inspecting structured data for AI agents.
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    Apache 2.0
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    A safety-gated Python MCP server for Metabase that lets MCP clients and agents inspect Metabase, run governed queries, and create or maintain dashboards, cards/questions, collections, snippets, permissions, and other Metabase assets through the Metabase REST API.
    GPL 3.0
  • F
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    Provides tools for AI-powered graph analysis, including relationship extraction, adjacency matrix creation, and network centrality calculations. It enables users to perform complex structural analysis and generate interactive D3.js visualizations from structured data.
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    A modular multi-server architecture providing development automation, JIRA management, and performance reporting for Claude Code. It features specialized tools for PR health analysis, code reviews, and generating comprehensive team and individual quarterly reports.
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    An MCP server that lets an LLM query a DuckDB warehouse of EuroLeague and EuroCup basketball data in natural language, offering tools for player and team stats, shot charts, boxscores, and fantasy draft analysis without contacting upstream APIs.
    13
    MIT
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    Enables AI agents to fetch live multi-chain portfolio, token info, gas prices, and token prices across Ethereum, Base, Polygon, Arbitrum, and Optimism with a single call. No API key required.
    4
    MIT
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    A single MCP server that transparently routes user requests to 83 open-data sources with built-in discovery and autonomous plugin creation.
    15
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    MIT