"Research assistant for AI and ML papers, code, and methodology" matching MCP servers:

Enables an AI agent to operate a spare Android phone through MCP: capture screenshots, inspect UI controls, tap/swipe, input Chinese text, launch apps, and optionally run rooted shell commands or transfer files. It also supports a live web console for remote viewing and control.

Enables a Claude Code cloud session to run shell commands inside a chroot jail on your own computer and to call the MCP servers already installed there, with every request authenticated and relayed over a Cloudflare quick tunnel so no router port is opened and no SSH key or tunnel is ever handed to the cloud VM.

MCP server that gives AI agents isolated, named Linux computers with stable IDs and lifecycle control. Supports multiple backends like Docker, Fly Machines, Modal, and E2B, with a dashboard for managing sandboxes.

An MCP server that implements Claude Code-like functionality, allowing the AI to analyze codebases, modify files, execute commands, and manage projects through direct file system interactions.

MCP server for E2B code sandbox, enabling creation, management, and execution of code in secure sandboxes using Python and shell commands.

Bridges Claude Desktop to local Windows 10 development environments to enable repository reading, documentation searching, and isolated code execution. It provides a secure interface for running allowlisted terminal commands and scripts directly through natural language.

MCP server wrapping Kimi Code CLI (kimi-k2.5) to provide tools for filesystem, shell, web, and agent operations.

An MCP server that enables AI agents to execute terminal commands and Python code on the host system, leveraging Agent Zero's battle-tested implementation with session management and smart output handling.

Enables Claude AI to run terminal commands, perform file operations, and manage git in a project directory via the Model Context Protocol.

Enables AI agents to safely execute Python code and shell commands in an ephemeral, isolated scratchpad with pre-execution AST security checks, timeout enforcement, token-shielded output, and file diff tracking. It also exposes static code-security inspection to flag forbidden imports and reflective escape attempts before execution.

Enables AI assistants to perform local development tasks on Windows by reading and editing files, running commands, and controlling browser and desktop tools, all within isolated workspaces. Supports secure remote access via an optional tunnel for ChatGPT clients.

Enables bidirectional communication with Claude via WhatsApp, allowing commands, file sharing, and persistent context without needing Claude Code open.

Gives a Microsoft Copilot Studio agent Claude-Code-style tools to read, edit, search, and run shell commands against your local filesystem.

A secure, local-first MCP coding and computer-use harness for ChatGPT and Codex, enabling guarded file operations, durable terminals, Git review, local skills, and macOS computer control.

Unofficial Powershell MCP server

Enables natural language SSH server management via Claude Code, allowing users to read logs, check services, run commands, and transfer files across multiple servers.

Pre-alpha P2P remote-control app with a local stdio MCP bridge for paired computers. Users build from source; platform support and host-side approvals apply.

An MCP server that provides secure code execution capabilities using AWS Bedrock AgentCore's CodeInterpreter, supporting Python, JavaScript, TypeScript, shell commands, and file operations.

It enables AI assistants to run installed command-line tools and scripts, drive persistent terminals and browsers, and retrieve saved jobs, screenshots, and other evidence on a server. It also provides a dashboard for tracking sessions, installed tools, and connection settings.

MCP server for running shell commands on a Linux development board via UART serial.

Enables reading and editing local files, running shell commands, inspecting processes, and working with local projects through a local-first, self-hosted server, with optional experimental browser and desktop clients.

Enables agent-style remote development over SSH with file operations and command execution, exposing native tools for searching, editing, and transferring files on remote machines.

TaskFlow AI is a premium MCP Server designed for AI editors, offering 40+ built-in tools covering file system, HTTP requests, databases, Git operations, and more.

Enables ChatGPT Web conversations to operate a Windows computer through MCP with local tools, permissions, task state, and audit evidence.

Self-hosted MCP coding server and unified local Control Center for ChatGPT web, enabling file editing, command execution, Git operations, and optional upstream MCP tools with conversation access controls.

Multi-threaded terminal management MCP server for AI assistants, enabling async command execution, batch operations, and real-time web monitoring with up to 100 concurrent terminals.

This server gives AI clients a persistent, isolated Linux container in which the model can run any bash command as root with internet access, install packages and start long-running processes without command filtering. Files produced inside it can be handed back to the user as signed, expiring public download links suitable for PDFs, images, audio and video.

Enables managing Linux hosts and local coding agents from an MCP client through shell commands, files, background jobs, system information, instruction and skill discovery, and optional Claude Code, Codex, or Cursor CLI conversations. It provides privileged remote access with token authentication and can run longer work in the background.

Enables AI clients to securely operate a local machine via MCP or REST, providing file read/write, Playwright browser automation, and shell/service administration.

Enables AI assistants to safely perform actions on your computer including file system management, command execution, clipboard access, application launching, and local search with license-based monetization built in.