"Research assistant for AI and ML papers, code, and methodology" matching MCP servers:

Provides web search and code execution capabilities using OpenAI models, with optional code interpreter and conversation continuity via response IDs.

Enables LLMs to manage and run machine learning training jobs on a remote server, including syncing code, submitting experiments, monitoring progress, reading TensorBoard metrics, and receiving completion notifications.

MCP server that gives AI agents isolated, named Linux computers with stable IDs and lifecycle control. Supports multiple backends like Docker, Fly Machines, Modal, and E2B, with a dashboard for managing sandboxes.

An MCP server that lets AI coding agents work on Godot 4 projects, including reading and editing scenes, writing and validating GDScript, running the game, and capturing screenshots.

A simple server that acts as a Master Control Program (MCP) for unified interaction with OpenAI and Anthropic (Claude) AI models through a single API endpoint.

An MCP server that integrates AI assistants like Claude with GitLab's merge requests, allowing them to review code changes, add comments, and approve/unapprove merge requests directly through the GitLab API.

Provides file operations (read/write) with an extensible architecture designed for future C code compilation and executable execution capabilities.

An MCP server that implements Claude Code-like functionality, allowing the AI to analyze codebases, modify files, execute commands, and manage projects through direct file system interactions.

MCP server for E2B code sandbox, enabling creation, management, and execution of code in secure sandboxes using Python and shell commands.

Bridges Claude Desktop to local Windows 10 development environments to enable repository reading, documentation searching, and isolated code execution. It provides a secure interface for running allowlisted terminal commands and scripts directly through natural language.

Enables AI agents to invoke a local Stata installation, including a Windows Stata build under Wine on Linux and macOS, for regression analysis, econometrics, paper replication, and empirical research with command guards, resource monitoring, and automatic log capture.

Enables Large Language Models to access and manipulate Autodesk Revit models through a pyRevit-based bridge and the Model Context Protocol.

Creates short-lived, offline JavaScript sandbox containers for safe code execution via MCP, with no network access and strict resource limits.

A MCP server for managing and storing code snippets in various programming languages, allowing users to create, list, and delete snippets via a standardized interface.

A Model Context Protocol server that helps large language models process code repositories by providing file tree generation, code merging, and code analysis capabilities.

An implementation of Claude Code as a Model Context Protocol server that enables using Claude's software engineering capabilities (code generation, editing, reviewing, and file operations) through the standardized MCP interface.

An MCP server for autonomous quantum computing research that searches arXiv, ingests papers, generates ideas, runs and validates experiments, and produces reports.

A server that integrates trained Random Forest models with Bee Framework, enabling ReAct interactivity for AI tools and agents.

This project aims to build a Claude Code MCP server and implement its associated tools (explain\_code, review\_code, fix\_code, edit\_code, test\_code, simulate\_command, your\_own\_query). The server is implemented using Node.js and the MCP SDK. It receives tool requests from clients via Stdio, dynamically

An MCP server that enables AI agents to execute terminal commands and Python code on the host system, leveraging Agent Zero's battle-tested implementation with session management and smart output handling.

Enables AI coding agents to generate standardized code using scaffolding templates, enforce architectural patterns, and validate outputs programmatically. Supports creating projects from boilerplates and adding features to existing codebases while maintaining team conventions.

Provides tools for AI-driven development workflows including file system operations, code analysis, code execution, web fetching, and search.

An MCP server to create secure code sandbox environment for executing code within Docker containers.

Enables AI agents to safely execute Python code and shell commands in an ephemeral, isolated scratchpad with pre-execution AST security checks, timeout enforcement, token-shielded output, and file diff tracking. It also exposes static code-security inspection to flag forbidden imports and reflective escape attempts before execution.

Enables AI coding assistants to query a persistent local code graph for targeted context, blast-radius analysis, and incremental updates, so they read only relevant files during reviews and large-repo workflows.

A runtime-free MCP server that converts source code into AST🌲, regardless of language.

Enables Codex to offload expensive code reading, editing, and checking to a worker agent via Claude Code, supporting async jobs and long-running tasks.

Enables AI assistants to interact with VS Code for language intelligence, debugging, and code execution.

Server that enhances the capabilities of the Cline coding agent. It provides intelligent code suggestions, reduces hallucinations, and documents the knowledge base by leveraging your project's documentation and detecting the technologies used in your codebase.

Execute Python code with persistent state across Claude conversations using a background Jupyter kernel. Supports creating notebooks, managing virtual environments, and maintaining variables/imports between code executions.