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- FlicenseAqualityBmaintenanceTransBench is a translational research agent that takes free-text clinical observations, decomposes them into biological axes, generates falsifiable hypotheses grounded in PubMed evidence, and designs reproducible computational experiments with concrete datasets for Claude Science.3
- AlicenseAqualityDmaintenanceMCP server for automated ICD-10 medical coding. Code clinical text to ICD-10-CM diagnoses, search 74,000+ codes, and de-identify PHI via the AutoICD API.641MIT
- AlicenseAqualityCmaintenanceMCP server that turns a medRxiv DOI into clean markdown full text and provides free, relevance-ranked preprint search via Europe PMC.21Apache 2.0
- AlicenseAqualityCmaintenanceProvides structured PubMed literature data for LLM agents, supporting search, caching, and open-access full-text downloads via the MCP protocol.54011Apache 2.0
- AlicenseAqualityBmaintenanceEnables LLMs to search LOINC terms with free-text, relevance-ranked, and faceted queries via the LOINC Search API, mirroring the loinc.org/search experience.5MIT
- AlicenseAqualityDmaintenanceA local MCP server enabling PubMed, PMC, and iCite API access via stdio for tools like search, fetch, full text, and citation counts.101602MIT
- AlicenseAqualityBmaintenanceMCP server that locally de-identifies health documents, such as prescriptions, reports, images, and PDFs, before use with Codex or Claude Code. It runs OCR and identifier detection on-device and only returns de-identified text to the agent when the automated policy check results in PASS.5Apache 2.0
- AlicenseAqualityDmaintenanceAn MCP server that provides access to PubMed and NCBI's biomedical literature database for searching articles, retrieving metadata, and tracking citations. It enables users to explore related research, browse MeSH vocabulary, and find free full-text links.6MIT
- AlicenseAqualityAmaintenanceMCP server and CLI for detecting, redacting, and auditing PHI in medical text before it reaches AI agents.4MIT
- AlicenseAqualityBmaintenanceMCP server and CLI for detecting, redacting, and auditing PHI in medical text before it is sent to AI agents, with tools for scan, redact, audit, and validate operations.4MIT
- AlicenseAqualityCmaintenanceA lightweight MCP server for clinical biomedical literature retrieval, enabling PubMed search, article metadata, full-text access, and evidence summarization through MCP-compatible clients.10MIT
- AlicenseBqualityDmaintenanceEnables AI assistants to search and retrieve biomedical research articles from PubMed's database of over 35 million citations, including metadata, abstracts, MeSH terms, and full-text PDFs when available.11MIT
- FlicenseBqualityFmaintenanceProvides comprehensive access to NCBI's PubMed database of over 36 million biomedical citations, allowing users to search, retrieve, and analyze literature directly through MCP tools. It supports advanced queries, citation management, full-text retrieval from PubMed Central, and precise discovery using MeSH terms.1615
- AlicenseCqualityCmaintenanceA PubMed MCP server that enables LLMs to search, retrieve details, and download full-text articles from PubMed, with support for batch queries, cross-referencing, and EndNote export.13405Apache 2.0
- Alicense-qualityCmaintenanceMCP server for querying gene annotations, full-text gene search, and species taxonomy via MyGene.info. Enables AI agents to access gene data through natural language questions.14MIT
- Alicense-qualityDmaintenanceEnables comprehensive biomedical literature research through PubMed database access with advanced search, full-text retrieval, citation analysis, and batch processing capabilities. Supports both local deployment and cloud hosting for seamless integration with AI assistants.1MIT
- Alicense-qualityCmaintenanceEnables AI assistants to search, access, and analyze PubMed articles through MCP, providing tools for keyword and advanced search, article metadata retrieval, full-text PDF download, and deep paper analysis.MIT
- Alicense-qualityBmaintenanceEnables LLM-assisted biomedical literature screening and structured extraction from PubMed alerts, PMIDs, DOIs, and GEO accessions, with full-text retrieval and multi-provider LLM support.2MIT
- Alicense-qualityCmaintenanceEnables querying and retrieving experimental protein structures from the RCSB Protein Data Bank, including text search, full entry records, polymer entities, ligands, and assemblies.21MIT