"SPARQL query language and tools" matching MCP servers:

Enables users to write and execute SPARQL queries against open-access SPARQL endpoints by providing relevant query examples, schema information, and endpoint metadata. Supports querying biological databases like UniProt and Bgee through natural language interactions.

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

An MCP server that gives LLMs live access to clinical trials, FDA drug recalls, adverse-event reports, drug labels, and drug-name normalization via six validated tools.

Enables natural language queries about Swiss mandatory health insurance coverage for medications and medical devices using official BAG lists.

Enables semantic retrieval and assembly of ICD-10-CM value sets from natural language descriptions for clinical cohort definitions.

Enables language models to search biomedical literature, fetch sequences, and follow links across Entrez databases through eleven read-only tools wrapping the nine NCBI Entrez E-utilities. It handles URL building, pacing, redirects, response caps, and API-key redaction so queries can be answered without a browser or scraping.

Connects PyMOL to Claude AI for conversational structural biology, molecular visualization, and analysis through natural language.

MyChart MCP Server

MCP server that provides tools to query harmonized gene-disease validity data from the Gene Curation Coalition, supporting consensus and conflict detection for gene-disease assertions.

Enables natural language querying of brain volumes (NIfTI) with a fixed set of tools, returning visualizations and reproducible nilearn code.

Enables Claude Desktop to query and analyze diabetes data from Omnipod 5 and Glooko through natural language, providing clinical audit and triage insights such as time in range, trends, and bolus analysis.

Enables AI assistants and local LLMs to interact with BirdNET-Go bioacoustic observatories, providing tools to query recent and historical bird detections, monitor station health, and retrieve audio clips.

Enables searching fictional lab tests, comparing prices, quoting and booking sample collections, and escalating to a human agent via natural language.

Provides read-only tools for planning, writing, and auditing lesion network mapping and connectome-based localization papers, including design classification, methods checklists, phrasebooks, limitations, and manuscript auditing.

A Model Context Protocol (MCP) server for interacting with Gen3 data commons, with GraphQL query validation to reduce hallucinations.

Enables natural language querying of EFSA's OpenFoodTox database containing 8,006 chemical substances with toxicity data, safety assessments, risk limits, and genotoxicity studies for food additives, pesticides, and contaminants.

Search 200M+ patents and scientific literature in natural language using PatSnap's global R&D intelligence database.

Enables searching biomedical images (X-rays, CT/MRI, clinical photos, etc.) from the Open-i database using natural language queries, returning image results as Markdown links.

Enables AI agents to analyze synthetic biomarker panels via Phi Longevity's PRISM clinical recommendation engine, providing tiered, guideline-cited recommendations. Also offers tools to list supported biomarkers and retrieve methodology.

Enables analysis of clinical trial protocols using MCP tools for document listing, entity extraction, adverse event clustering, and summarization.