"Managing and Working with Files" matching MCP servers:

MyChart MCP Server

Enables agents to interact with a clinic booking API, including listing specialties, doctors, and a patient's appointments, and booking or cancelling appointments when the active profile permits, while preserving the caller's authority and screening tool descriptions for safety.

Enables interaction with the CEDAR metadata repository, including fetching templates, searching BioPortal ontology terms, and managing template instances.

An MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.

Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.

Provides seamless integration with FHIR APIs, enabling AI/LLM tools to search, retrieve, and analyze clinical healthcare data with support for SMART-on-FHIR authentication and multiple transport protocols.

Reads raw lab-instrument files (microscopy, mass spectrometry, chromatography, flow cytometry, NMR, electrophysiology, spectroscopy, plate readers, qPCR) without vendor software, returning metadata, images, spectra and traces as JSON. It also checks files for damage, runs common analyses, and exports to open formats such as OME-TIFF, OME-Zarr, mzML, Parquet and NWB.

Enables users to store and query their own medical data—labs, medications, diagnoses, wearables, and food logs—in a local Postgres database and interact with it through any MCP client, with deterministic safety checks.

Answers medication questions from official FDA labels with section citations, resolves drug names via RxNorm, and reports FDA recalls and shortages.

A TypeScript MCP server for interacting with CDISC Define-XML 2.0 and 2.1 files, enabling users to load, search, and retrieve clinical data metadata including datasets, variables, and codelists. It supports local file processing with document caching and provides responses in both JSON and Markdown formats.

Enables querying simulated healthcare professional engagement data from Supabase, including HCP profiles, interactions, consent status, prescribing trends, and segment analytics through natural language.

Enables Claude to access IntakeQ practice management data including scheduling, intake forms, treatment notes, invoices, and client records with HIPAA-compliant audit logging.

Enables managing clinic appointments through MCP tools and an interactive widget, including viewing availability, booking visits, and confirming appointments.

Enables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

Enables interaction with Open Dental practice management software, allowing reading of patients, appointments, providers, procedures, and recalls, as well as writing communications back to patient charts via MCP clients.

Enables querying FDA drug shortages and recalls joined with federal contract data to assess supplier exposure, with confidence-level evidence and no signup.

Provides read/write access to any FHIR-compliant healthcare API with built-in validation, supporting resource management, search operations, and granular permissions through natural language.

Retrieve genomic data from EGA, ENA, ENCODE, GEO and NCBI, read bounded regions from indexed BAM/CRAM, VCF and bigWig files, and query source-attributed reference evidence. Runs locally with 23 MCP tools. MIT-licensed; research use.

Enables querying clinical trial information from the Chinese Clinical Trial Registry (ChiCTR) by searching trials with keywords, registration numbers, or years, and retrieving detailed trial information.