"How to use the terminal or command line interface" matching MCP servers:

Enables AI agents to rank US healthcare organizations for clinical trial site feasibility, predicting patient accrual for a Graves' disease protocol using claims and registry data.

Enables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).

Enables AI assistants to read COVID-19 lateral flow test results from photographs by calling a deployed computer-vision pipeline, returning verdicts like positive or negative with confidence.

Enables LLM-based agents to interact with FHIR healthcare data through natural language prompts, providing full CRUD operations on FHIR resources, document processing, and semantic search capabilities.

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

Connects Claude to the U.S. National Library of Medicine MeSH APIs to search and retrieve medical authority data, descriptors, and qualifiers. It enables library and metadata staff to perform subject analysis and confirm terminology within an AI-assisted cataloging workflow.

Enables language models to search biomedical literature, fetch sequences, and follow links across Entrez databases through eleven read-only tools wrapping the nine NCBI Entrez E-utilities. It handles URL building, pacing, redirects, response caps, and API-key redaction so queries can be answered without a browser or scraping.

Grounds gene-nomenclature work in the HUGO Gene Nomenclature Committee (HGNC) dataset, enabling resolution of gene symbols and IDs to canonical HGNC identifiers, plus cross-references and batch operations.

An MCP server implementing the ROBINS-I V2 framework for risk-of-bias assessment in non-randomized studies, with deterministic algorithms and full provenance. It enables users to parse study documents, specify target trial results, answer signalling questions with evidence-bound quotes, and compute or override domain judgements.

MyChart MCP Server

Enables AI assistants to clean PDB structures and run initial-stage energy relaxation for biomolecular modeling. It provides a structured workflow for preparing structures before production molecular dynamics or coarse-graining pipelines.

MCP server that reads glucose data from a FreeStyle sensor via the LibreLinkUp API, providing current glucose and history with explicit coverage and gaps.

Enables querying the Polish National Health Fund (NFZ) public API for medical waiting lists and service dictionary, allowing AI to compare wait times and find providers.

MCP server for automated ICD-10 medical coding. Code clinical text to ICD-10-CM diagnoses, search 74,000+ codes, and de-identify PHI via the AutoICD API.

Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.

Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

An MCP server that provides direct access to PubMed and PubMed Central via the NCBI E-utilities API. It enables AI models to search biomedical literature, retrieve detailed article metadata, and download open-access full texts.

Provides read-only access to the ProPaths verified protein interactome, letting AI agents search proteins, retrieve mechanistic interaction details, and explore pathway ontology through MCP tools, resources, and prompts.

Renders interactive 2D molecular structure diagrams from SMILES notation and computes molecular properties like molecular weight, LogP, and TPSA, directly in the chat.

Empowers AI agents with direct access to the official ClinicalTrials.gov database, enabling programmatic searching, retrieval, and analysis of clinical study data through a Model Context Protocol interface.