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"How to set up an MCP server" matching MCP servers:
- FlicenseAqualityDmaintenanceEnables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.6
- AlicenseAqualityFmaintenanceAn MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.1911218MIT
- AlicenseAqualityBmaintenanceEnables gene set enrichment analysis using the Enrichr API across hundreds of gene set libraries including Gene Ontology, pathways, diseases, tissues, drugs, and transcription factors. Returns only statistically significant results for interpretation.25815MIT
FHIRfly MCP Serverofficial
AlicenseNot gradedqualityBmaintenanceMCP server for connecting Claude Desktop to FHIRfly healthcare reference data APIs, enabling lookup of drugs, providers, clinical codes, and more.222MIT- AlicenseNot gradedqualityBmaintenanceAn MCP server for CharmHealth EHR that allows LLMs and MCP clients to interact with patient records, encounters, and practice information.10MIT
snowstorm-mcp-serverofficial
AlicenseNot gradedqualityBmaintenanceEnables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.8Apache 2.0- AlicenseNot gradedqualityDmaintenanceEnables MCP clients like Claude Desktop to interact with openEHR REST APIs (EHRbase) for creating compositions, managing EHRs, listing templates, and executing AQL queries.18MIT
- AlicenseNot gradedqualityAmaintenanceDecodes, searches, validates, and crosswalks US medical codes (ICD-10-CM, ICD-10-PCS, HCPCS Level II) using an offline bundled index via MCP.7862Apache 2.0
- AlicenseNot gradedqualityCmaintenanceAn MCP server that provides access to the NIH UMLS API and the NIH VSAC FHIR API. This server enables AI models to search medical terminology, look up concept definitions, explore relationships between medical concepts, map codes between different medical coding systems, and work with curated clinical value sets.1MIT
- AlicenseNot gradedqualityCmaintenanceEnables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).MIT
- AlicenseNot gradedqualityAmaintenanceEnables looking up genes, fetching sequences, predicting variant consequences, finding orthologs, and cross-database xrefs via Ensembl REST API through MCP.1532Apache 2.0
- AlicenseNot gradedqualityDmaintenanceEnables AI assistants to generate, validate, and optimize PLUMED input files for molecular dynamics simulations using a set of MCP tools.GPL 3.0
- AlicenseNot gradedqualityCmaintenanceAn MCP server implementing the Wildlife Insights GraphQL API, providing natural language tools for wildlife management and species identification.17MIT
- AlicenseNot gradedqualityAmaintenanceLink compounds to protein targets, rank bioactivity (IC50/Ki/EC50), and look up drug mechanisms and indications over ChEMBL via MCP.361Apache 2.0
- AlicenseNot gradedqualityAmaintenanceLook up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in — via MCP.541Apache 2.0
- AlicenseNot gradedqualityAmaintenanceLook up US healthcare providers in the NPPES NPI registry and resolve NUCC specialty codes via MCP.1541Apache 2.0
- AlicenseNot gradedqualityDmaintenanceAn MCP server for searching healthcare providers in the US National Provider Identifier (NPI) Registry, enabling natural language queries for provider data in MCP-compatible AI assistants.Apache 2.0
- AlicenseNot gradedqualityBmaintenanceReproduces the in-silico toxicological profile of Heracleum sosnowskyi metabolites from Rassabina & Fedorov (2025) using open-source models for LD50 prediction, toxicity classification, chemical space clustering, and synthesis cost estimation.MIT
- FlicenseNot gradedqualityCmaintenanceEnables an AI agent to query a patient-records SQLite database with tools for schema inspection, safe SQL queries, patient risk assessment, and readmission risk analysis.
