"How to run Docker and view logs" matching MCP servers:

MyChart MCP Server

Enables querying and exploring PhysioNet biomedical datasets via BigQuery, with tools to list accessible datasets, view schemas, inspect tables, and run SQL queries.

Enables AI assistants to clean PDB structures and run initial-stage energy relaxation for biomolecular modeling. It provides a structured workflow for preparing structures before production molecular dynamics or coarse-graining pipelines.

Enables AI assistants and local LLMs to interact with BirdNET-Go bioacoustic observatories, providing tools to query recent and historical bird detections, monitor station health, and retrieve audio clips.

Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.

Provides safe read-only access to synthetic healthcare data via FHIR R4, enabling AI assistants to search patients, retrieve vitals, and summarize conditions using a public sandbox.

Enables read-only FHIR access to Practice Fusion EHR to search patients, appointments, conditions, medications, and lab results.

Enables conversational access to 400,000+ clinical trials on ClinicalTrials.gov, allowing users to search, compare, and retrieve trial details using plain English through MCP-compatible clients like Cursor and Claude Desktop.

Provides access to EMBL-EBI bioinformatics data including InterPro domains, Pfam families, protein features, and taxonomy through a unified tool.

MCP server for Tebra practice management that gives AI agents access to 45 tools for patients, appointments, billing, documents, and clinical data via SOAP and FHIR APIs.

Enables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.

MCP server for controlling Opentrons robots (OT-2/Flex) via HTTP API v2 and Python Protocol API, enabling protocol validation, upload and execution, status monitoring, run control, and documentation search.

Enables unified access to 110 life science APIs and databases, including genomics, proteomics, chemistry, literature, and clinical data. Users can query genes, proteins, compounds, pathways, and more through natural language.

A high-performance MCP server that gives LLMs access to 25 biomedical tools federated across 50+ upstream APIs for genes, variants, drugs, diseases, literature, clinical trials, and structural biology.

Provides fast lexical and optional semantic search over NiiVue neuroimaging visualization library documentation and API reference. Enables LLMs to query guides, retrieve API documentation from TypeScript source, and access structured information through cached BM25 and embedding-based search.

Exposes each stage of the Champollion sulcal embedding pipeline as MCP tools, enabling agents to run, monitor, and debug the pipeline without manual shell commands.

Provides read/write access to any FHIR-compliant healthcare API with built-in validation, supporting resource management, search operations, and granular permissions through natural language.

Provides seamless access to the Protein Data Bank in Europe (PDBe) API and search capabilities, enabling AI clients to query protein structures, perform advanced searches, and retrieve structural biology data.

An MCP server that connects AI assistants to OpenEMR instances to manage patient records, clinical trends, and medication safety. It provides 17 tools for tasks such as patient search, drug interaction checks, and generating comprehensive health trajectories and visit preparations.

Provides programmatic access to AlphaFold protein structure predictions and UniProt data, enabling users to retrieve protein structures, summaries, and annotations through natural language.