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    Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.
    17
    MIT
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    Enables interaction with the CEDAR metadata repository, including fetching templates, searching BioPortal ontology terms, and managing template instances.
    8
    MIT
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    An MCP server that interfaces with Gigwa for genotyping data import, analysis, and audit, enabling users to perform complex workflows through natural language commands.
    29
    Apache 2.0
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    An MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.
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    18
    MIT
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    Enables LLM-based agents to interact with FHIR healthcare data through natural language prompts, providing full CRUD operations on FHIR resources, document processing, and semantic search capabilities.
    13
    97
    MIT
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    Enables interaction with the CEDAR (Center for Expanded Data Annotation and Retrieval) metadata repository to fetch templates and retrieve template instances. Supports querying structured metadata and biomedical data annotations through the CEDAR platform.
    2
    MIT
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    An MCP server that interacts with the ClinicalTrials.gov API v2 to perform drug safety assessments and adverse event comparisons. It enables users to search for clinical trials, retrieve detailed study information, and analyze safety profiles across various medications and control groups.
    5
    GPL 3.0
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    MCP server that exposes the OpenMRS/Bahmni REST API as tools for Claude to interact with Bahmni instances.
    19
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    Enables AI assistants to interact with the Open Targets Platform API to search and retrieve comprehensive data about target-disease associations, drugs, genes, and drug discovery information through GraphQL queries.
    37
    Apache 2.0
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    MCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.
    37
    MIT
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    An MCP server that exposes the KEGG REST API — pathways, genes, compounds, reactions, enzymes, diseases, drugs, modules, orthology, glycans, and BRITE hierarchies, with cross-database linking. Provides 34 tools and 8 resource templates.
    MIT
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    Enables molecular generation, optimization, and analysis through NVIDIA MolMIM API. Supports generating drug-like molecules with desired properties, extracting molecular embeddings, and exploring chemical space around seed molecules.
    MIT