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"How to control macOS" matching MCP servers:
- AlicenseAqualityAmaintenanceEnables AI agents to control Fiji/ImageJ for microscopy image analysis through natural language commands, supporting operations like image opening, filtering, particle analysis, and automated workflows.192BSD 3-Clause
- AlicenseAqualityDmaintenanceMCP server for remote control of napari viewers via Model Context Protocol, enabling AI-assisted microscopy analysis with Claude Desktop and other LLM applications.1638BSD 3-Clause
- AlicenseAqualityDmaintenanceA high-performance MCP server that gives LLMs access to 25 biomedical tools federated across 50+ upstream APIs for genes, variants, drugs, diseases, literature, clinical trials, and structural biology.25672MIT
- FlicenseAqualityCmaintenanceMCP server for controlling Opentrons robots (OT-2/Flex) via HTTP API v2 and Python Protocol API, enabling protocol validation, upload and execution, status monitoring, run control, and documentation search.6
- AlicenseAqualityDmaintenanceEnables natural language control of UCSF ChimeraX for protein structure visualization, editing, and analysis through MCP clients.393MIT
- AlicenseBqualityDmaintenanceAn MCP server that interacts with the ClinicalTrials.gov API v2 to perform drug safety assessments and adverse event comparisons. It enables users to search for clinical trials, retrieve detailed study information, and analyze safety profiles across various medications and control groups.5GPL 3.0

FHIRfly MCP Serverofficial
Alicense-qualityBmaintenanceMCP server for connecting Claude Desktop to FHIRfly healthcare reference data APIs, enabling lookup of drugs, providers, clinical codes, and more.222MIT- Alicense-qualityDmaintenanceBridge any AI coding assistant directly to GenePattern — run bioinformatics modules, manage cloud jobs, and stream results, all through natural language.2BSD 3-Clause

Bio-MCP FastQC Serverofficial
Alicense-qualityDmaintenanceEnables AI assistants to perform quality control analysis on high-throughput sequencing data using FastQC and MultiQC. It supports single-file and batch processing of FASTQ/FASTA files and generates comprehensive, interactive summary reports.MIT
snowstorm-mcp-serverofficial
Alicense-qualityBmaintenanceEnables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.7Apache 2.0
galaxy-mcpofficial
Alicense-qualityAmaintenanceMCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.37MIT- Alicense-qualityCmaintenanceEnables access to the IUPHAR/BPS Guide to PHARMACOLOGY database for querying drug targets, ligands, and pharmacological data without API keys.10MIT
- Alicense-qualityCmaintenanceEnables interaction with FHIR resources on Google Cloud Healthcare API through a SmartOnFHIR gateway secured by Firebase Auth, providing access to patient data, medical records, and medical research tools like PubMed.1MIT
- Alicense-qualityCmaintenanceEnables AI agents to control RELION 5.x cryo-EM structure determination software through natural language, providing 23 tools for the complete single-particle analysis pipeline.4MIT
- Alicense-qualityDmaintenanceEnables MCP clients like Claude Desktop to interact with openEHR REST APIs (EHRbase) for creating compositions, managing EHRs, listing templates, and executing AQL queries.18MIT
- Alicense-qualityCmaintenanceMCP-native scientific skills for reproducible computational biology and AI-driven drug-discovery workflows. It combines deterministic scientific tools with an MCP server to give AI agents real computational capabilities.Apache 2.0
- Alicense-qualityDmaintenanceProvides access to BioThings.io APIs for comprehensive gene and variant annotations, enabling seamless integration of biological data into workflows.1,1886MIT
- Alicense-qualityCmaintenanceMCP server for querying the GWAS Catalog (EBI/NHGRI), a curated catalog of genome-wide association studies. It enables AI agents to search and retrieve study data via natural language or direct tool calls.4MIT
- Alicense-qualityCmaintenanceEnables querying and browsing ontologies from the EBI Ontology Lookup Service, including searching for terms, retrieving term details, and navigating ontology hierarchies via natural language.8MIT