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maintenanceEnables LLM agents to design proteins, predict structures, score interfaces, and run molecular dynamics simulations through a unified interface.
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Apache 2.0
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"Figma – Collaborative Design and Prototyping Tool" matching MCP servers:
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nmdc-mcpofficial
AlicenseAqualityBmaintenanceA fastmcp-based tool for writing prompts against data in the NMDC database.Last updated162MIT- AlicenseBqualityFmaintenanceEnables molecular design and simulation through 45 chemistry tools including pKa calculations, geometry optimization, conformer searches, docking, protein cofolding, and ADMET predictions powered by Rowan's computational chemistry platform.Last updated4123MIT
sniff-mcpofficial
Alicense-qualityBmaintenanceAgent-callable canine genomics API providing breed-stratified allele frequencies, pathogenicity predictions, and variant-gene-breed-disease knowledge graph for dog DNA.Last updatedMIT- Alicense-qualityDmaintenanceBridge any AI coding assistant directly to GenePattern — run bioinformatics modules, manage cloud jobs, and stream results, all through natural language.Last updated2BSD 3-Clause
galaxy-mcpofficial
Alicense-qualityAmaintenanceMCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.Last updated37MIT- Alicense-qualityBmaintenanceTurns the Cochrane Library into a tool for AI agents to search and retrieve clinical evidence, including systematic reviews, trials, and plain-language summaries.Last updated241MIT
- Alicense-qualityDmaintenanceEnables molecular generation, optimization, and analysis through NVIDIA MolMIM API. Supports generating drug-like molecules with desired properties, extracting molecular embeddings, and exploring chemical space around seed molecules.Last updatedMIT
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- Alicense-qualityBmaintenanceEnables AI assistants to rapidly gather and synthesize structural, chemical, conservation, and literature data about protein binding pockets for drug-target triage. Useful as a reconnaissance step before computational binder design.Last updated1MIT
- Alicense-qualityCmaintenanceEnables AI assistants to query gene annotations, expression, pathways, variants, and more via the MyGene.info API, supporting batch operations and multiple biological data sources.Last updatedMIT
