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77,042 servers. Updated
20 Best GitHub MCP Servers — compared and ranked, August 2026Ranked from 1,620 matching servers on stars, growth, downloads and maintenance. Updated .

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"Exploring GitHub Repositories for File and Folder Organization Inspiration" matching MCP servers:

  • OpenEHR MCP Server

    ajinkyasabale-github
    -
    license
    Not graded
    quality
    Not graded
    maintenance
    Enables LLMs to interact with OpenEHR electronic health record systems by retrieving clinical archetypes, generating AQL queries from natural language, and executing queries against on-premise EHR databases. Supports OpenEHR Clinical Knowledge Manager integration and custom IIS-hosted EHR APIs for comprehensive medical data access.

  • ryogena-pubmed-mcp

    KyleVick4
    A
    license
    A
    quality
    D
    maintenance
    Exposes NCBI PubMed as MCP tools for searching literature, fetching abstracts, exploring citation graphs, and finding author publications without requiring an API key.
    4
    MIT

  • Define-XML MCP Server

    defineEditor
    F
    license
    A
    quality
    D
    maintenance
    A TypeScript MCP server for interacting with CDISC Define-XML 2.0 and 2.1 files, enabling users to load, search, and retrieve clinical data metadata including datasets, variables, and codelists. It supports local file processing with document caching and provides responses in both JSON and Markdown formats.
    13

  • Protein MCP Server

    gqy20
    A
    license
    B
    quality
    D
    maintenance
    Enables searching, retrieving, and downloading protein structure data from the RCSB Protein Data Bank. Supports intelligent protein structure search, comprehensive data retrieval, and multiple file format downloads for bioinformatics research.
    3
    MIT

  • HealthLedger MCP

    Cole-Will-I-Am
    A
    license
    B
    quality
    B
    maintenance
    A local-first, model-agnostic MCP server that stores personal health data in a SQLite file and provides analysis-ready views for any AI client to log, retrieve, and reason over health records.
    79
    MIT
  • xcircl by xcircl

    xcirclofficial

    xcircl
    A
    license
    Not graded
    quality
    B
    maintenance
    Enables querying US regulated-care providers (GLP-1 clinics) with tools for searching, retrieving details, and checking compliance, using natural language or function calls.
    2
    MIT
  • easydocforms-mcp by easydocforms

    easydocforms-mcpofficial

    easydocforms
    A
    license
    Not graded
    quality
    C
    maintenance
    An MCP server for healthcare intake forms that lets AI agents import blank PDFs, create patient fill links, and retrieve completed PDFs while keeping PHI out of the model context.
    MIT
  • sniff-mcp by Sniffscore

    sniff-mcpofficial

    Sniffscore
    A
    license
    Not graded
    quality
    B
    maintenance
    Agent-callable canine genomics API providing breed-stratified allele frequencies, pathogenicity predictions, and variant-gene-breed-disease knowledge graph for dog DNA.
    MIT
  • Bio-MCP FastQC Server by bio-mcp

    Bio-MCP FastQC Serverofficial

    bio-mcp
    A
    license
    Not graded
    quality
    D
    maintenance
    Enables AI assistants to perform quality control analysis on high-throughput sequencing data using FastQC and MultiQC. It supports single-file and batch processing of FASTQ/FASTA files and generates comprehensive, interactive summary reports.
    MIT
  • snowstorm-mcp-server by IHTSDO

    snowstorm-mcp-serverofficial

    IHTSDO
    A
    license
    Not graded
    quality
    B
    maintenance
    Enables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.
    7
    Apache 2.0
  • galaxy-mcp by galaxyproject

    galaxy-mcpofficial

    galaxyproject
    A
    license
    Not graded
    quality
    A
    maintenance
    MCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.
    37
    MIT

  • MolMIM MCP Server

    siarhei-fedziukovich
    A
    license
    Not graded
    quality
    D
    maintenance
    Enables molecular generation, optimization, and analysis through NVIDIA MolMIM API. Supports generating drug-like molecules with desired properties, extracting molecular embeddings, and exploring chemical space around seed molecules.
    MIT