"Database search and data processing tools" matching MCP servers:

Exposes four CMS public datasets as callable tools in Claude conversations, enabling natural-language real-world evidence analytics without SQL expertise.

MCP server for PubMed search and literature summarization

Enables clinical question answering via OpenEvidence with citation verification, including tools to ask questions, retrieve results, and follow up, plus an integrated skill to check citations against primary sources.

Provides in-process RDKit cheminformatics operations — descriptors, fingerprints, similarity and substructure search, reaction enumeration, standardization, and 3D conformer generation — for AI agents.

Enables secure natural language querying of a clinical SQL Server database using a local Ollama model, with strict SQL validation to protect sensitive data.

Enables searching the NIAID Data Ecosystem for biomedical research resources including datasets, clinical studies, and publications using Elasticsearch queries.

Search Vascue's public healthcare-operations documentation: AI front desk for clinics, provider-side insurance claims automation, Cliniko integration, security. Public content only.

Search 200M+ patents and scientific literature in natural language using PatSnap's global R&D intelligence database.

A Claude Code extension that embeds a senior athenahealth integration engineer in your development workflow, proactively catching data loss bugs and guiding safe DataView queries and API integrations.

Enables MCP-capable AI clients to characterize proteins end to end: PDB/mmCIF validation, sequence extraction and typing, pLDDT confidence summaries, metal-site geometry with bidentate chelate detection, GROMACS trajectory metrics and plots, and live UniProt, AlphaFold DB, and RCSB lookups. Also ships a point-and-click Protein Lab web UI (and a persistent run registry) so students and wet-lab biologists can get the same results without any client setup.

Enables querying Chinese medical information (drugs, diseases, doctors, symptoms) from the Dayi platform with structured output and auto-type detection.

Enables agents to search six clinical-trial channels (global registries, Chinese registries, CDE drug-trial data, and offline snapshots) through one sealed endpoint, merging results only on confirmed registration identity and returning per-source terminal states, coverage caveats, and data cutoffs. This ensures a missing or empty answer can never be silently mistaken for proof that no trial exists.

Enables LLM agents to query de-identified FHIR-shaped hospital data through audited, read-only tools for patients, encounters, conditions, observations, medications, and interaction checks, while any medication write stays a draft that a clinician must confirm out-of-band.

Provides FHIR resource validation, synthetic test fixture generation, and HIPAA-safe logging review as MCP tools for AI agents.

Enables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.

MCP server for the STRING protein–protein interaction database, hosted by STRING at mcp.string-db.org. Adapted for LLM grounding: responses are size-limited and include metadata and notes on interpretation and next steps. Tools cover identifier resolution, interaction networks and evidence, functional and PPI enrichment, and sequence similarity search.

Source-provenanced US federal healthcare provider data over MCP. Resolve any NPI or CCN across NPPES, OIG LEIE, SAM.gov, state Medicaid exclusions, CMS PECOS, Care Compare, and Open Payments — every field carries a 14-field provenance contract, and an "excluded or compromised anywhere" check runs on every lookup.

Enables deep probabilistic analysis of single-cell omics data using scvi-tools through natural language. Supports SCVI for scRNA-seq analysis, SCANVI for cell type annotation, TOTALVI for multi-modal RNA/protein data, and PEAKVI for scATAC-seq analysis.

Enables AI assistants to access and query ARTPARK's public health datasets including dengue epidemiology, livestock census, and FMD vaccination data through a structured 4-step workflow for data discovery and retrieval.

Public read-only MCP server providing structured access to Atlarium habitat data and advisory functions for aquariums, terrariums, and related systems.