A
license-
qualityC
maintenanceEnables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).
MIT
72,476 servers. Updated
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"Connecting to Gemini Flash Experimental" matching MCP servers:
- MIT
- FlicenseAqualityDmaintenanceEnables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.6
- AlicenseAqualityCmaintenanceConnects to wetlab protocol resources such as protocols.io, enabling users to access and manage experimental protocols via natural language.22Apache 2.0
- AlicenseAqualityAmaintenanceOpen-source guardrails between AI agents and FHIR clinical data — PHI redaction, immutable audit, step-up auth, tenant isolation. MCP server + OpenAI/Gemini adapters. A healthclaw.io project.2929MIT
FHIRfly MCP Serverofficial
Alicense-qualityBmaintenanceMCP server for connecting Claude Desktop to FHIRfly healthcare reference data APIs, enabling lookup of drugs, providers, clinical codes, and more.222MIT- Alicense-qualityDmaintenanceBridge any AI coding assistant directly to GenePattern — run bioinformatics modules, manage cloud jobs, and stream results, all through natural language.2BSD 3-Clause
snowstorm-mcp-serverofficial
Alicense-qualityBmaintenanceEnables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.7Apache 2.0
galaxy-mcpofficial
Alicense-qualityAmaintenanceMCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.37MIT- Alicense-qualityCmaintenanceEnables interaction with FHIR resources on Google Cloud Healthcare API through a SmartOnFHIR gateway secured by Firebase Auth, providing access to patient data, medical records, and medical research tools like PubMed.1MIT
- Alicense-qualityCmaintenanceEnables AI agents to control RELION 5.x cryo-EM structure determination software through natural language, providing 23 tools for the complete single-particle analysis pipeline.2MIT
- Alicense-qualityDmaintenanceEnables MCP clients like Claude Desktop to interact with openEHR REST APIs (EHRbase) for creating compositions, managing EHRs, listing templates, and executing AQL queries.18MIT
- Alicense-qualityCmaintenanceMCP-native scientific skills for reproducible computational biology and AI-driven drug-discovery workflows. It combines deterministic scientific tools with an MCP server to give AI agents real computational capabilities.Apache 2.0
- Alicense-qualityDmaintenanceProvides access to BioThings.io APIs for comprehensive gene and variant annotations, enabling seamless integration of biological data into workflows.1,3476MIT
- Alicense-qualityCmaintenanceMCP server for querying the GWAS Catalog (EBI/NHGRI), a curated catalog of genome-wide association studies. It enables AI agents to search and retrieve study data via natural language or direct tool calls.4MIT
- Alicense-qualityCmaintenanceAccess to 1000 Genomes Project dataset, hosted online in Dnaerys variant store2Apache 2.0
- Alicense-qualityCmaintenanceEnables AI agents to query the PomBase fission yeast model-organism database for genetic and molecular data through the Pipeworx MCP gateway.4MIT
- Alicense-qualityBmaintenanceMCP server for the Semble practice-management API, enabling AI agents to search for patients, contacts, and users, as well as retrieve patient relationships via read-only tools.MIT
- Alicense-qualityAmaintenanceRead-only biomedical MCP server connecting PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB, Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch Initiative, GWAS Catalog, and more. One command grammar for all biomedical entities — genes, variants, diseases, drugs, trials, articles, phenotypes, pathways, proteins, diagnostics, and adverse events. 27 tools. Apache-2.0 license.1Apache 2.0
- Alicense-qualityDmaintenance56 tools for nutritionists to manage patients, meal plans, prescriptions, clinical records, and anthropometry via MCP clients like Claude and Cursor.MIT
