"Connect to MySQL server, edit database structure, and run manual migrations" matching MCP servers:

Enables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).

Searches UniProt by protein name to find accession numbers and retrieves detailed protein structure information from AlphaFold, including direct links to 3D structural predictions.

A RAG-based MCP server for natural language querying of Brazilian healthcare manuals (SIH/SUS, SIA/SUS) and official ordinances. It provides 16 tools for semantic search, regulatory critique analysis, and retrieving data from SIGTAP and CNES.

MCP server for the STRING protein–protein interaction database, hosted by STRING at mcp.string-db.org. Adapted for LLM grounding: responses are size-limited and include metadata and notes on interpretation and next steps. Tools cover identifier resolution, interaction networks and evidence, functional and PPI enrichment, and sequence similarity search.

Enables AI assistants to read COVID-19 lateral flow test results from photographs by calling a deployed computer-vision pipeline, returning verdicts like positive or negative with confidence.

Public read-only MCP server providing structured access to Atlarium habitat data and advisory functions for aquariums, terrariums, and related systems.

MyChart MCP Server

Enables AI agents to rank US healthcare organizations for clinical trial site feasibility, predicting patient accrual for a Graves' disease protocol using claims and registry data.

Provides access to the AlphaFold Protein Structure Database with tools for structure retrieval, confidence analysis, batch processing, and visualization.

A structure-aware MCP server for querying the SPOKE biomedical knowledge graph, enabling entity resolution, schema introspection, path finding, and safe Cypher queries for biomedical knowledge inference.

Exposes 24 evidence-grounded medical skills as JSON-RPC tools over stdio, letting agents run deterministic clinical calculators, PHI de-identification, negation-preserving multilingual parsing, and drug interaction checks locally with no token cost. It also enforces provenance and safety gates so high-risk dosing or prescribing decisions require documented clinical records rather than model inference.

Enables AI assistants to clean PDB structures and run initial-stage energy relaxation for biomolecular modeling. It provides a structured workflow for preparing structures before production molecular dynamics or coarse-graining pipelines.

Monitors PubMed and medRxiv for configurable research topics, summarizes papers using a local LLM, and stores deduplicated results in a local database.

Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.

Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

Enables natural language querying of EFSA's OpenFoodTox database containing 8,006 chemical substances with toxicity data, safety assessments, risk limits, and genotoxicity studies for food additives, pesticides, and contaminants.

Renders interactive 2D molecular structure diagrams from SMILES notation and computes molecular properties like molecular weight, LogP, and TPSA, directly in the chat.

Search 200M+ patents and scientific literature in natural language using PatSnap's global R&D intelligence database.

Enables searching biomedical images (X-rays, CT/MRI, clinical photos, etc.) from the Open-i database using natural language queries, returning image results as Markdown links.

Enables verification of Indian doctors by querying the National Medical Commission's Indian Medical Register for registration, profiles, and blacklist status, with fallback guidance for manual lookup.

Connects to FHIR R4 servers and enables natural language search, read, and optional write of FHIR data from MCP clients like Claude Desktop/Code.

Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.

Provides safe read-only access to synthetic healthcare data via FHIR R4, enabling AI assistants to search patients, retrieve vitals, and summarize conditions using a public sandbox.

Enables AI agents and applications to search, retrieve, and analyze chemical compounds, substances, and bioassays from PubChem's vast chemical information database through comprehensive tools for chemical research and discovery.

MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.

Enables read-only FHIR access to Practice Fusion EHR to search patients, appointments, conditions, medications, and lab results.

Enables conversational access to 400,000+ clinical trials on ClinicalTrials.gov, allowing users to search, compare, and retrieve trial details using plain English through MCP-compatible clients like Cursor and Claude Desktop.

Enables MCP hosts to run provenance-aware computational epitope research workflows, including sequence and immune-evidence analysis, structure and chemistry calculations, molecular docking, and checksummed 3D artifact exports.

An MCP server that provides tools for searching and fetching protein data from the UniProt database using the unipressed library.

Enables querying the openFDA drug adverse event database for pharmacovigilance work-ups: case searches, counts and demographic/outcome breakdowns, disproportionality measures (ROR/PRR with Mantel-Haenszel adjustment), and empirical Bayes (MGPS/EBGM) signal scores, including bulk screening and stratification by sex, age, or year alongside confounder-adjusted analyses.