A
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qualityD
maintenanceEnables users to query ClinicalTrials.gov using natural language instead of complex API parameters, translating plain English requests into structured API calls and returning organized clinical trial data.
MIT
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"Adding functionality to large language models" matching MCP servers:
- Alicense-qualityCmaintenanceEnables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).MIT
- MIT
- AlicenseAqualityAmaintenanceAn MCP server that provides mouse genetics data from Mouse Genome Informatics (MGI), enabling LLM agents to query markers, mutations, alleles, phenotypes, and disease models.131MIT
- AlicenseAqualityDmaintenanceEnables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.3169MIT
- AlicenseAqualityDmaintenanceAn MCP server for NONMEM pharmacometric modeling that provides structured access to model parsing, execution, and results analysis. It enables users to perform diagnostics, manage PsN workflows, and translate models to mrgsolve for PK simulations through natural language.2215MIT
- FlicenseAqualityDmaintenanceProvides read/write access to any FHIR-compliant healthcare API with built-in validation, supporting resource management, search operations, and granular permissions through natural language.51
- AlicenseBqualityDmaintenanceEnables wing simulation and aerodynamic analysis for pterosaur-inspired flight models. Provides lift, drag, and thrust calculations through the pterasim module with analytical fallbacks when the native module is unavailable.1MIT
- FlicenseBqualityDmaintenanceProvides programmatic access to AlphaFold protein structure predictions and UniProt data, enabling users to retrieve protein structures, summaries, and annotations through natural language.3
- AlicenseBqualityBmaintenancePredicts CRISPR gene dependencies and drug targets by integrating literature, regulatory/PPI networks, and genome-scale metabolic models.18Apache 2.0
reactome-mcpofficial
AlicenseBqualityFmaintenanceEnables AI assistants to search, browse, analyze, and export biological pathway data from Reactome through natural language.566Apache 2.0- AlicenseBqualityDmaintenanceEnables running avian flight dynamics simulations through the Flappy simulator. Provides typed configuration models and deterministic fallback calculations for bird flight analysis.1MIT
- AlicenseBqualityDmaintenanceAn MCP server that provides a toolbox for interacting with EPA SWMM stormwater models, enabling users to analyze model data and interpret results through LLM-driven tools. It assists stormwater modelers in understanding hydraulic systems and modeling behavior using natural language interfaces.186MIT
- AlicenseBqualityFmaintenanceEnables comprehensive interaction with DHIS2 health information systems through 40+ tools covering complete Web API functionality. Supports data management, tracker programs, analytics, and bulk operations for DHIS2 development and administration.47186MIT
- Alicense-qualityBmaintenanceEnables querying US regulated-care providers (GLP-1 clinics) with tools for searching, retrieving details, and checking compliance, using natural language or function calls.2MIT
Bio-MCP BLASTofficial
Alicense-qualityDmaintenanceEnables AI assistants to perform NCBI BLAST sequence similarity searches through natural language, supporting nucleotide and protein searches, custom database creation, and multiple output formats.10MIT- Alicense-qualityDmaintenanceBridge any AI coding assistant directly to GenePattern — run bioinformatics modules, manage cloud jobs, and stream results, all through natural language.2BSD 3-Clause
Elnora MCP Serverofficial
Alicense-qualityAmaintenanceConnects AI agents to the Elnora bioprotocol optimization platform, enabling generation, management, and optimization of wet-lab protocols through natural language.1853Apache 2.0- Alicense-qualityBmaintenanceTurns the Cochrane Library into a tool for AI agents to search and retrieve clinical evidence, including systematic reviews, trials, and plain-language summaries.181MIT
- Alicense-qualityCmaintenanceEnables AI agents to control RELION 5.x cryo-EM structure determination software through natural language, providing 23 tools for the complete single-particle analysis pipeline.2MIT
