"App Store" matching MCP servers:

Guides researchers, including those new to BPP, from raw sequence data to a validated control file that has passed a short test run. Wraps BPP command-line tools without running long analyses itself.

Access to 1000 Genomes Project dataset, hosted online in Dnaerys variant store

Enables AI agents to query Human Phenotype Ontology clinical phenotype terms, navigate term hierarchies, and retrieve gene-disease and disease-phenotype annotations through keyless MCP tools.

Enables AI assistants to query VCF files through MCP tools that summarize variants, identify pathogenic and carrier variants, interpret pharmacogenomic results, and determine APOE status, with web app and Claude Desktop support.

Public MCP endpoint for Adverse Outcome Pathway (AOP) discovery, scientific review, and draft-to-publication workflows.