"A server for running bioinformatics tools" matching MCP servers:

Enables AI agents to perform local video, audio, and file operations inside an isolated workspace, including cutting/concat videos, extracting audio, transcribing, and managing files, with typed responses and background job support.

Provides a local MCP server for AI-powered web crawling on Windows, enabling agents to directly crawl and extract web content without requiring WSL.

MCP server for personal knowledge management providing AI-powered tools for semantic search, audio transcription, image generation, and PPT creation.

MCP server that exposes tools to route natural language queries to typed IDs, describe catalog entries, and list repository verification commands for the m-dev-tools organization.

Read-only MySQL MCP server that lets AI agents list tables, describe schemas, and run SELECT/SHOW/EXPLAIN queries with a row cap, bound to a single database for safety.

An MCP server that provides a persistent sandbox for AI coding agents to explore codebases server-side, returning only compact summaries to reduce context consumption.

Unofficial Powershell MCP server

Provides AI assistants with specialized tools to interact with NIST's Open Security Controls Assessment Language (OSCAL) framework. It enables agents to retrieve schemas, explore models, and generate valid OSCAL documentation for security compliance automation.

Enables extraction of recipes from PDFs or JPG files and conversion into structured HTML, with interactive region selection and OCR via a web GUI.

Provides aerodynamic analysis tools through MCP, enabling geometry generation, meshing, CFD solving, and visualization for 2D airfoils.

Enables Large Language Models to access and manipulate Autodesk Revit models through a pyRevit-based bridge and the Model Context Protocol.

Enables AI agents to interact seamlessly with Splunk environments through 20+ tools for search, analytics, data discovery, administration, and health monitoring. Features AI-powered troubleshooting workflows and supports multiple Splunk instances with production-ready security.

Provides MSP support tools (ticket search, draft response, KB search, update) with a deterministic security guardrail that refuses to draft responses for security tickets based on content scanning, even if mislabeled.

An Operit-compatible adapter of the Exa MCP server, enabling web search, code search, and company research capabilities in AI assistants. It fixes MCP handshake compatibility issues, allowing tools like web_search_exa and web_fetch_exa to load and run reliably.

MCP server for file operations with non-UTF-8/Unicode encoding: Cyrillic, CP1251, CP1252, ISO-8859, KOI8 auto-detection

Provides actionable financial intelligence tools for AI agents including insider buying signals, earnings IV plays, market pulse, stock analysis, and options strategies via free public data sources.

A lightweight MCP server providing common utility tools such as unit conversion, password generation, date calculation, hashing, Base64 encoding/decoding, UUID generation, text case conversion, and text statistics, with no external dependencies.

Enables inspecting local OpenAPI specification files by listing and retrieving spec details with filters and $ref resolution.

Enables LLMs to interact with Kibana through composable toolboxes for building dashboards, managing data, and handling alerts, among other operations.

MCP server for accurately reading and writing Excel .xlsx files while preserving structure, styles, and formulas. Provides tools for inspecting, editing, and aggregating spreadsheet data, with optional LibreOffice recalculation.