pymol-mcpBiology & MedicineResearch & DatawjgoarxivAlicenseBqualityBmaintenanceHeadless PyMOL for molecular visualization, GROMACS/LAMMPS MD trajectories, and clathrate-hydrate cage analysis: H-bond networks, F3/F4 order parameters, and TRACE cage perception + occupancy. Updated 8 days ago (2026-08-15 16:15 UTC)32MIT