Semantic search across all manuscript content

Find content semantically similar to given text

Cluster content into main themes/topics

Show how concept is discussed across documents

Find terms mentioned but not explained

Create hierarchical outline from content

Suggest better content organization

Find sections with no incoming links

Check heading hierarchy and section balance

Visualize connections between documents

Detect broken internal and external links

Suggest where to add links between sections

Follow concept through linked documents

Find inconsistent term usage

Extract all TODO/FIXME/DRAFT markers

Analyze readability metrics

Find near-duplicate content

Overall project statistics

Show what changed since timestamp

Create progress dashboard

Search writing session history by date range or query

Get detailed context for a specific file or concept from past sessions

List writing decisions by file, type, or date range

Record a writing mistake to avoid repeating it

Search for similar mistakes to avoid repeating them

Store a publisher or style requirement

Get all requirements or filter by type

Record a style decision for consistency

Show how a file evolved through git commits with rationale

Track how a concept's definition evolved over time

Detect contradictions in concept definitions across versions

Link git commits to writing sessions for context

Unified search across all memory layers (content, decisions, mistakes, concepts, sessions, commits)

Get all context for a file (sessions, decisions, mistakes, commits)

Check context before editing a file - get warnings about past mistakes, decisions, and requirements to maintain consistency