BinDiff MCP Tool
Click on "Deploy Server".
Wait a few minutes for the server to deploy. Once ready, it will show a "Started" state.
In the chat, type
@followed by the MCP server name and your instructions, e.g., "@BinDiff MCP Tool compare original.bin and patched.bin to see which functions changed"
That's it! The server will respond to your query, and you can continue using it as needed.
Here is a step-by-step guide with screenshots.
BinDiff MCP Tool
A Model Context Protocol (MCP) server that provides binary comparison capabilities using IDA Pro and BinDiff.
Features
Compare Binaries: Compare two binary files (e.g., original vs. patched).
Function Analysis: Get a summary of similarity and a list of changed functions.
Headless Operation: Uses IDA Pro in headless mode and IDAPython for automation.
Related MCP server: ida-pro-mcp-plus
Installation
Prerequisites
Python 3.10+
IDA Pro (9.0+ recommended)
BinDiff (installed and capable of running from command line).
uv (recommended for package management).
Installing BinDiff on Linux (Ubuntu/Debian)
Download the latest
.debpackage (e.g.,bindiff_8_amd64.deb) from the official releases.Install using dpkg:
sudo dpkg -i bindiff_8_amd64.debVerify installation:
which bindiff
Platform-Specific Configuration
The tool attempts to auto-detect IDA and BinDiff. You can override these by setting environment variables or editing src/config.py.
macOS
IDA Pro: 9.1 (recommended) or 9.0+.
BinDiff: Installed via installer.
Environment:
IDADIR: Path to IDA installation (e.g.,/Applications/IDA91/IDA Professional 9.1.app/Contents/MacOS).BINDIFF_PATH: Path tobindiffbinary (e.g.,/usr/local/bin/bindiff).
Linux (Ubuntu etc.)
IDA Pro: 9.0+ installed (e.g., in
/opt/idapro-9.1).BinDiff: Installed and accessible.
Environment:
IDADIR: Required. Set to your IDA installation base directory containinglibidalib.so(e.g.,/opt/idapro-9.1).BINDIFF_PATH: Path tobindiffexecutable (default checks$PATH).Ensure
idalibis present in$IDADIR/idalib.
Configuration
Environment Variables
IDADIR: Path to the IDA Pro installation directory (containingidatandidalib).BINDIFF_PATH: Path to thebindiffexecutable.MCP_TIMEOUT: Timeout for analysis steps in seconds (default: 3600).
Installation
Clone this repository.
Install dependencies using
uv:uv sync
Usage
Running Remotely (SSE) - Recommended
Start the server in SSE mode so it can be accessed by remote or local clients via HTTP:
Linux (Docker/Server):
IDADIR=/app/ida-pro-9.1 BINDIFF_PATH=/usr/bin/bindiff uv run bindiff-mcp --transport sse --host 0.0.0.0 --port 8001macOS:
IDADIR="/Applications/IDA91/IDA Professional 9.1.app/Contents/MacOS" BINDIFF_PATH=/usr/local/bin/bindiff uv run bindiff-mcp --transport sse --host 0.0.0.0 --port 8001Client Configuration (Antigravity, Claude Desktop, etc.)
Configure your MCP client to connect via the /sse endpoint:
{
"mcpServers": {
"bindiff-mcp": {
"type": "remote",
"url": "http://127.0.0.1:8001/sse"
}
}
}Development
Structure:
src/server.py: Main MCP server entry point.src/core/: Core logic for IDA export, BinDiff execution, and parsing.src/config.py: Configuration handling.
Available Tools
1 toolbindiff_compareA
Compares two binary files using IDA Pro and BinDiff.
Resulting detailed difference lists are saved to the specified directory (default: current directory).
Generated files:
1. matched_similar.json (Identical functions)
2. matched_different.json (Matched but Changed functions)
3. primary_only.json (Unmatched in Primary)
4. secondary_only.json (Unmatched in Secondary)
Args:
primary_binary: Path to the first binary (e.g. original)
secondary_binary: Path to the second binary (e.g. patched)
output_results_dir: Directory to save the result files (default: current dir)
Inputs: primary_binary (required), secondary_binary (required), output_results_dir. Returns: result
Tool Schema Changelog
Recent tool additions, removals, and schema changes observed during successful MCP inspections.
Loading tool schema changelog…
TDQS
Scored across 1 tool
With only one tool, there is no possibility of ambiguity or overlap between tools. The single tool has a clearly defined purpose of comparing binary files using BinDiff and IDA Pro.
The single tool name 'bindiff_compare' follows a clear verb_noun pattern and is consistent with itself. There are no other tools to create inconsistency.
A single tool is generally too few for most server purposes, making the surface feel thin and incomplete. While this might be appropriate for a very narrow utility, it limits functionality and suggests the server may be under-scoped.
The server appears focused on binary comparison, but with only a compare tool, there are significant gaps. Missing operations might include analyzing results, managing comparisons, or integrating with other BinDiff features, making the surface incomplete for typical binary analysis workflows.
Maintenance
Related MCP Connectors
Hunt zero-days by talking to binaries. 40+ tools. Hosted, OAuth + SSO, invite: hi@byteray.ai
Evidence-oriented REA + Ghidra static-analysis workflows, read-only PE32 and Delphi VMT tools.
PDF, photo, email, and file comparison evidence checks with plain-language reports.
Change-impact intelligence for tracing dependencies, stale references and required updates.
Related MCP Servers
- AlicenseNot gradedqualityDmaintenanceExtends IDA Pro with multi-instance support and vulnerability scanning for AI-assisted reverse engineering.12MIT
- AlicenseNot gradedqualityDmaintenanceAn enhanced MCP server for IDA Pro that integrates bulk binary export, multi-instance management via Broker mode, and 80+ analysis tools for AI-assisted reverse engineering.6MIT
- AlicenseAqualityCmaintenanceEnables AI agents to perform Ghidra binary diffing, returning structured match statistics, function changes, and code diffs as JSON.132MIT
- AlicenseNot gradedqualityCmaintenanceEnables reverse-engineering agents to export binaries to BinExport format and compare two builds, returning matched, changed, and build-unique functions with addresses, names, similarity, and confidence scores. Diff results are written as JSON files with overall similarity and confidence summaries.56 PyPI1MIT