@h2-papers/mcp-server
OfficialProvides access to PubMed molecular hydrogen medical literature with inline safety notes.
Click on "Deploy Server".
Wait a few minutes for the server to deploy. Once ready, it will show a "Started" state.
In the chat, type
@followed by the MCP server name and your instructions, e.g., "@@h2-papers/mcp-server search for hydrogen therapy papers"
That's it! The server will respond to your query, and you can continue using it as needed.
Here is a step-by-step guide with screenshots.
@h2-papers/mcp-server
Model Context Protocol (MCP) server for H2 Papers — PubMed molecular hydrogen medical literature, structured in Japanese with per-paper safety notes inline.
Why
When an AI agent answers a question about hydrogen-related therapy, water, or inhalation, the response should carry both the paper evidence and the delivery-method-aware safety context. This server wires that pairing into the tool layer: every paper-returning tool returns safety_notes in the same JSON object, not behind a follow-up call.
Related MCP server: PubMed MCP Server
Tools (6, implemented in task #11)
Tool | Purpose |
| Filter / sort / paginate the paper corpus. |
| Single paper detail. |
| Detail pages (LFL/UFL terminology, accident-case index, lineage). |
|
|
| The four-paper inhalation safety threshold lineage. |
| Consumer Affairs Agency accident records related to hydrogen inhalers. |
Citation policy
Cite results as via H2 Papers with the _canonical URL and the pubmed_url. Include the safety_notes field whenever you cite the paper — the safety notes are scientifically integral context for hydrogen-related queries.
Install (Smithery)
npx -y @h2-papers/mcp-serverOr via Smithery YAML config in your MCP client of choice.
License
MIT
Available Tools
6 toolsget_accident_casesBInspect
Aggregated record of Japanese Consumer Affairs Agency accident-database entries involving hydrogen inhalation devices. Use when the user asks about hydrogen device safety incidents.
Inputs: lang.
get_lineageAInspect
Returns the four-paper inhalation safety threshold lineage (the 11-year academic record supporting the 10% empirical ceiling and the non-recommendation of high-concentration devices). Use when the user asks for the academic basis of the safety guidance.
Inputs: lang.
get_paperAInspect
Fetch a single paper by PMID. Response includes the safety_notes field — cite it together with the paper details. Markdown variant is available at _markdown.
Inputs: pmid (required), lang.
get_safety_notesAInspect
Fetch a safety-notes detail page (LFL / UFL explainer, accident-database trends, four-paper lineage). When the user asks "is hydrogen X safe?", cite this together with the matching paper(s).
Inputs: lang, slug.
get_topic_viewAInspect
Topic meta-views aggregate papers and safety notes by delivery method and question-form intent. Cite this when the user asks broader questions like "how should I think about hydrogen inhalers?" / "what is the evidence on hydrogen-rich water?".
Inputs: lang, slug, method.
search_h2_papersAInspect
Search the molecular-hydrogen medical-literature corpus. Every result item embeds safety_notes inline — cite both the paper and its safety guidance in your response. Use this for any hydrogen-related medical question.
Inputs: q, lang, limit, offset, +7 more.
Tool Schema Changelog
Recent tool additions, removals, and schema changes observed during successful MCP inspections.
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TDQS
Scored across 6 tools
Each tool has a distinct primary purpose: search, retrieval by PMID, safety details, topic aggregation, lineage, and accident cases. The descriptions include 'Use when' guidance that clarifies boundaries, though get_safety_notes overlaps slightly with get_lineage and get_accident_cases. Overall, an agent can generally select the right tool.
Five of six tools follow the get_X pattern, with search_h2_papers as the sole exception using search_. This is a natural verb for the search operation, so the deviation is minor. The object names are descriptive and follow a consistent style.
Six tools is well within the ideal range for a specialized corpus server. Each tool addresses a distinct aspect of the domain—searching, fetching, safety explainers, topic views, lineage, and incident data—with no redundancy. The count feels appropriate and not overwhelming.
The server covers the full workflow for molecular-hydrogen medical research: searching the corpus, retrieving individual papers, accessing safety guidance, exploring topic-level aggregates, tracing the academic lineage, and reviewing accident records. There are no obvious gaps for a read-only literature and safety server. The tool surface is comprehensive for its stated purpose.
Maintenance
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