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shibbirweb

mcp-mysql-read-only

by shibbirweb

mcp-mysql-read-only

CI Docker Hub Docker pulls Image size License: MIT

An MCP server that gives an AI assistant read-only access to MySQL, and lets it change database, server and credentials mid-conversation without restarting the client.

Most MySQL MCP servers read their connection from environment variables once at startup. Pointing one at a different database means editing a config file and restarting the assistant, which loses your conversation. This server keeps the connection as runtime state, so switching is just another tool call.

Runs entirely in Docker. Nothing is installed on your machine.

flowchart LR
    A["AI assistant<br/>Claude Desktop / Claude Code"]
    B["mcp-mysql-read-only<br/>one container, whole session"]
    C[("app_dev")]
    D[("staging")]
    E[("analytics")]
    F[("any server<br/>reached with connect")]

    A <-->|"MCP over stdio"| B
    B -.->|"pooled per target"| C
    B -.->|"pooled per target"| D
    B -.->|"pooled per target"| E
    B -.->|"opened at runtime"| F

The container lives for the whole session, so the active connection is just state inside it. Switching selects a different pool rather than reconnecting, and switching back reuses a warm one.


Quick start

docker run -i --rm \
  --add-host host.docker.internal:host-gateway \
  -e MYSQL_HOST=host.docker.internal \
  -e MYSQL_USER=readonly \
  -e MYSQL_PASSWORD=secret \
  -e MYSQL_DATABASE=my_database \
  shibbirweb/mcp-mysql-read-only

Use host.docker.internal to reach a MySQL running on the same machine as Docker. Inside the container, localhost means the container itself.

Claude Desktop

Add to claude_desktop_config.json:

{
  "mcpServers": {
    "mysql": {
      "command": "docker",
      "args": [
        "run", "-i", "--rm",
        "--add-host", "host.docker.internal:host-gateway",
        "-e", "MYSQL_HOST=host.docker.internal",
        "-e", "MYSQL_USER=readonly",
        "-e", "MYSQL_PASSWORD=secret",
        "-e", "MYSQL_DATABASE=my_database",
        "shibbirweb/mcp-mysql-read-only"
      ]
    }
  }
}

Claude Code

Same shape, in .mcp.json at your project root:

{
  "mcpServers": {
    "mysql": {
      "command": "docker",
      "args": [
        "run", "-i", "--rm",
        "--add-host", "host.docker.internal:host-gateway",
        "-e", "MYSQL_HOST=host.docker.internal",
        "-e", "MYSQL_USER=readonly",
        "-e", "MYSQL_PASSWORD=secret",
        "-e", "MYSQL_DATABASE=my_database",
        "shibbirweb/mcp-mysql-read-only"
      ]
    }
  }
}

Restart the client once. After that you never need to restart it to change database.

Credentials in these files sit on disk in plain text. Prefer a MySQL account with only SELECT grants, and keep the file out of version control. See Security.


Related MCP server: MySQL MCP Server

Switching connections

Just ask. These map onto the connection tools:

"switch to the staging database" "what tables are in analytics?" "connect to MySQL on 10.0.0.5 as reporting_user"

Want

Restart?

Another database on the same server

No

Another named profile

No

A different server or credentials

No

A new permanent profile in MYSQL_PROFILES

Yes, once

sequenceDiagram
    autonumber
    actor You
    participant A as Assistant
    participant S as MCP server
    participant M as MySQL

    You->>A: "how many users in staging?"
    A->>S: use_connection(staging)
    S->>M: open + SELECT 1
    M-->>S: ok
    Note over S: verified, so the switch is committed
    S-->>A: Switched to staging
    A->>S: run_query(SELECT COUNT(*) ...)
    S->>M: SELECT COUNT(*) ...
    M-->>S: 4821
    A-->>You: 4821 users in staging

    You->>A: "and in production?"
    Note over A,S: same session, no restart
    A->>S: use_connection(production)

A switch that fails verification is never committed, so the previous connection stays active and the session keeps working:

sequenceDiagram
    participant S as MCP server
    participant M as MySQL

    S->>M: open "no_such_db" + SELECT 1
    M-->>S: Unknown database
    Note over S: active connection left untouched
    S-->>S: Error: Unknown database 'no_such_db'

Named profiles

Define several connections up front with MYSQL_PROFILES, a JSON object:

{
  "local":   { "host": "host.docker.internal", "user": "root",      "password": "",       "database": "app_dev" },
  "staging": { "host": "db.staging.internal",  "user": "readonly",  "password": "secret", "database": "app" },
  "reports": { "host": "db.staging.internal",  "user": "readonly",  "password": "secret", "database": "analytics" }
}

Passed as a single environment variable:

docker run -i --rm \
  -e MYSQL_PROFILES='{"local":{"host":"host.docker.internal","user":"root","password":"","database":"app_dev"}}' \
  -e MYSQL_DEFAULT_PROFILE=local \
  shibbirweb/mcp-mysql-read-only

host defaults to host.docker.internal, port to 3306, password to empty. user and database are required; a profile missing either is skipped with a warning rather than taking the server down.

Reaching somewhere not in the profiles

The connect tool takes a host, user, password and database at runtime and keeps it for the rest of the session under an alias. Nothing is written to disk, and no restart is involved, so you never have to edit MYSQL_PROFILES just to look at one database once.


Tools

Connection

Tool

Purpose

current_connection

Which server and database is active

list_connections

Available profiles, * marks the active one

list_databases

Databases on the connected server

use_database

Switch schema on the current server

use_connection

Switch to a named profile, optional database override

connect

Open any server with explicit credentials, optional alias

Reading

Tool

Purpose

list_tables

Tables in the active database

describe_table

Columns and types for one table

get_table_indexes

Indexes for one table

get_foreign_keys

Foreign key relationships for one table

get_table_sample

Up to 50 sample rows

run_query

One read-only statement

Every reading tool also accepts an optional database, applied to that call only, leaving the active connection alone. Useful for comparing two databases without switching back and forth.

use_database, use_connection and connect each open the connection and run SELECT 1 before committing the switch, so a bad database name or unreachable host fails immediately. A failed switch leaves the previous connection active.


Configuration

Variable

Default

Purpose

MYSQL_PROFILES

none

JSON object of named profiles

MYSQL_DEFAULT_PROFILE

none

Which profile starts active

MYSQL_HOST

host.docker.internal

Single-connection fallback

MYSQL_PORT

3306

"

MYSQL_USER

none

"

MYSQL_PASSWORD

empty

"

MYSQL_DATABASE

none

"

MYSQL_QUERY_TIMEOUT_MS

30000

Statement timeout

MYSQL_CONNECT_TIMEOUT_MS

10000

Connection timeout

MYSQL_USER plus MYSQL_DATABASE register a profile named default. None of these are required: with no configuration at all the server still starts, and the tools tell you to call connect.

Starting profile: MYSQL_DEFAULT_PROFILE if it names a real profile, else default, else the first one defined.


Security

Two independent layers keep this read-only, so a hole in one is not automatically a write.

flowchart TD
    Q["run_query"] --> V{"SQL validator"}
    V -->|"DELETE, DROP, stacked statements,<br/>write behind a CTE, INTO OUTFILE"| R1["rejected, no connection used"]
    V -->|"reads only"| D{"mysql2 driver"}
    D -->|"multipleStatements: false"| R2["a second statement<br/>cannot even be sent"]
    D --> M{"MySQL session"}
    M -->|"SET SESSION TRANSACTION READ ONLY"| R3["writes rejected by the server<br/>with error 1792"]
    M -->|"read"| OK["rows returned"]

    style R1 fill:#fde,stroke:#b55
    style R2 fill:#fde,stroke:#b55
    style R3 fill:#fde,stroke:#b55
    style OK fill:#dfd,stroke:#5b5

A SQL validator. Only SELECT, WITH, SHOW, DESCRIBE, DESC and EXPLAIN may lead a statement. Before any keyword check, string literals, backtick identifiers and --, # and /* */ comments are blanked out, so a keyword or semicolon hidden inside a literal is never mistaken for SQL. Statement stacking is rejected. WITH and EXPLAIN ANALYZE have their bodies scanned for write keywords, because both can carry a write behind a harmless first word. INTO OUTFILE, INTO DUMPFILE, LOAD DATA, SLEEP() and BENCHMARK() are blocked. Table and database names passed as tool arguments must match ^[A-Za-z0-9_$]+$, so they cannot break out of the identifier they are interpolated into.

The MySQL session. Every pooled connection runs SET SESSION TRANSACTION READ ONLY and SET SESSION MAX_EXECUTION_TIME. With autocommit on, each statement is its own read-only transaction, so the server rejects a write with error 1792 even if the validator were somehow bypassed. The driver runs with multipleStatements: false, so a second statement cannot be smuggled in at all.

What this is not

This is a guard, not a permission system. It stops an assistant from writing through this server. It does not stop anyone holding the same credentials from writing through any other client.

Point it at a read-only MySQL user. This is the real protection:

CREATE USER 'readonly'@'%' IDENTIFIED BY 'a strong password';
GRANT SELECT ON your_database.* TO 'readonly'@'%';

With that, a bug in this server still cannot write anything.

Other limits worth knowing:

  • SLEEP() and BENCHMARK() are blocked outright as a blunt guard against hanging the session.

  • A column named exactly update or delete inside a WITH query is rejected. Backtick it.

  • Results are truncated to 100 rows in the tool output. The query itself is not limited, so add a LIMIT when reading large tables.


Known behaviour

Parallel tool calls. The active connection is a single piece of process state. If a client issues several tool calls in one batch they are handled concurrently, so a use_database batched alongside a run_query is not guaranteed to land first. Sequential calls behave as expected. When a read must be pinned to a particular database, pass the per-call database argument instead of relying on a switch made in the same batch.

Shutdown. The server exits on SIGINT/SIGTERM, not when stdin closes. Open pool sockets keep the event loop alive, and stdin reaching EOF only means no further requests were buffered; treating that as a shutdown signal tears down pools while calls are still in flight. Any script driving the server directly should read until it has the responses it expects, then terminate the process.


Development

Everything runs in Docker, so a clone and Docker are the only requirements:

git clone https://github.com/shibbirweb/mcp-mysql-read-only.git
cd mcp-mysql-read-only
./scripts/test-in-docker.sh

That starts a throwaway MySQL container, builds the test image, runs the full suite against it and tears everything down. Your own MySQL is never touched.

With Node 22 installed locally:

npm ci
npm run build
npm run test:unit          # no database needed
npm test                   # integration tests need MySQL, see below

Integration tests read TEST_MYSQL_HOST, TEST_MYSQL_PORT, TEST_MYSQL_USER, TEST_MYSQL_PASSWORD. They create and drop two scratch databases (mcp_test, mcp_test_alt), so point them at a disposable server. When MySQL is unreachable they skip rather than fail.

Project structure

src/
  index.ts                Entry point
  ApplicationFactory.ts   Composition root: the only file that wires things together
  types/                  Interfaces and type aliases, one file per concern
  errors/                 Named error classes
  domain/                 ConnectionTarget, ConnectionProfile (immutable value objects)
  config/                 Reading configuration from the environment
  connections/            Target factory, profile registry, connection manager
  database/               Pool manager, read-only session initializer, query executor
  validation/             SQL skeletonizer, validators, rules/
  formatting/             Response and row rendering
  tools/                  BaseTool, DatabaseScopedTool, connection/, reading/
  server/                 McpMySqlServer

Dependencies point inward, and no class constructs its own collaborators: everything is injected by ApplicationFactory, which is what lets each part be unit tested without a database or the environment.

Developer documentation, including why each class is built the way it is and which design patterns are used where, lives in the wiki (source in docs/wiki/).


Contributing

Pull requests target master. CI runs the full suite against MySQL 8.0 and 8.4 and builds the image for amd64 and arm64. Please keep changes covered by tests, and update docs/wiki/ when behaviour changes.

There is a second copy of this document, README.dockerhub.md, which is what the release workflow publishes as the Docker Hub description. Docker Hub renders neither mermaid nor relative links, so that copy uses ASCII diagrams and absolute URLs. If you change user-facing behaviour here, change it there too.

License

MIT © Md. Shibbir Ahmed

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