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safe-fix-mcp

PyPI License: MIT

A real MCP server that finds dead code in a Python repository and proposes a branch + PR for the one class of finding that's actually safe to auto-remove: unused imports on a single-name import line. Everything else it finds — unused functions, classes, unused dependencies — stays report-only. A human always merges. This tool never merges anything itself.

Why this exists

Most "dead code" tools stop at reporting. The ones that go further usually delete with no safety net. This does neither: it drafts a real, minimal, reviewable PR, gated on the target repo's own full test suite actually passing after the removal — not a heuristic, a real pytest run. If the suite fails, nothing is committed or pushed; the repo is left exactly as it started.

Related MCP server: Python Code Guardian MCP Server

Tools

scan_dead_code(repo_path=".", min_confidence=60)

Read-only. Runs vulture (dead code) and deptry (dependency issues) and returns a human-readable list of findings. Never modifies anything.

propose_removal_pr(repo_path=".")

  • Refuses on a dirty working tree — never edits on top of uncommitted work.

  • Filters to unused imports at ≥90% vulture confidence, on single-name import lines only (from x import y, z is skipped — removing the whole line would silently remove z too).

  • Creates a real branch, removes the qualifying imports, runs the repo's real full test suite.

  • Only on a real pass: commits, pushes, and tries to open a PR via gh pr create.

  • If gh isn't installed/authenticated, the branch is still committed and pushed for real — only PR creation degrades, with the real error returned so you can open it manually.

Install

pip install safe-fix-mcp

Add to your MCP client config (e.g. Claude Code):

claude mcp add safe-fix-mcp -- safe-fix-mcp

Or run directly for local testing:

python -m safe_fix_mcp.server

Installing from source instead of PyPI:

pip install -e .

Skill

A SKILL.md ships inside this same package — not a separate download — and teaches Claude when and how to use the two tools correctly (e.g. that propose_removal_pr only ever auto-removes single-name unused imports, never functions/classes/dependencies). Install it into your project:

safe-fix-mcp-install-skill

Run it from the project root you want the skill active in — it writes to .claude/skills/safe-fix-mcp/SKILL.md relative to your current directory.

Requirements

  • Python ≥ 3.10

  • git on PATH

  • gh (GitHub CLI) on PATH and authenticated, if you want propose_removal_pr to actually open the PR — without it, the branch still gets pushed for real, and the tool tells you to open the PR by hand.

Development

pip install -e ".[dev]"
pytest

Known limitation

vulture flags scan_dead_code/propose_removal_pr themselves as "unused" — a known false-positive class, not a real bug: they're dispatched by the @mcp.tool() decorator at runtime, not called directly anywhere in the source, so static call-graph analysis can't see the real caller (the MCP framework itself).

Verifying it for real

scripts/verify_real_client.py launches the packaged server as a real subprocess and talks to it with the real mcp.client.ClientSession — the same path a real MCP client uses. Useful as a smoke test after any change:

python scripts/verify_real_client.py

Available Tools

2 tools
propose_removal_prA

Propose a real branch+PR removing only unused imports (single-name import lines, >= 90% vulture confidence) from a Python repository. Runs the repo's own full test suite as a safety gate before ever committing or pushing — a failure there reverts everything and nothing is committed or pushed. If gh isn't available or PR creation otherwise fails, the branch is still committed and pushed for real; only the PR itself needs opening manually. A human always merges — this never merges anything itself.

repo_path: path to a real git repository with a clean working tree (uncommitted changes are refused, not overwritten).

NameRequiredDescriptionDefault
repo_pathNo.

Output Schema

NameRequiredDescription
resultYes
scan_dead_codeA

Scan a Python repository for real dead code (vulture) and dependency issues (deptry). Read-only — never modifies anything. Returns a human-readable list of findings, or "No real candidates found."

repo_path: path to the repository to scan (must contain a pyproject.toml for the dependency checks to run; dead-code scanning works regardless). min_confidence: vulture's own confidence threshold (0-100). Lower values surface more candidates but more false positives.

NameRequiredDescriptionDefault
repo_pathNo.
min_confidenceNo

Output Schema

NameRequiredDescription
resultYes

Tool Schema Changelog

Recent tool additions, removals, and schema changes observed during successful MCP inspections.

  1. 2 tool updatesv0.1.2
    • First observedpropose_removal_pr
    • First observedscan_dead_code

TDQS

A4.4/5.0

Scored across 2 tools

Disambiguation5/5

scan_dead_code is purely read-only analysis, while propose_removal_pr actually creates a branch and PR. Their purposes are complementary and unlikely to be confused.

Naming Consistency4/5

Both tool names use lower_snake verb-first conventions: scan_dead_code and propose_removal_pr. The pattern is predictable, though the second name is slightly less clean because 'removal_pr' bundles an action and an object into one noun phrase.

Tool Count3/5

Two tools is on the thin side and sits at the borderline of feeling complete. However, each tool has a distinct role in a focused analyze-then-propose workflow, so the small count is plausible for a narrow server.

Completeness3/5

The scan surfaces both dead code and dependency issues, but propose_removal_pr only handles unused imports. Dependency fixes and non-import dead-code removals are therefore dead ends, creating a notable gap in the advertised safe-fix domain.

Maintenance

ActivityInactive
ResponsivenessNo recent community issues

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