bioportal-mcp
Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
No arguments | |||
Capabilities
Features and capabilities supported by this server
| Capability | Details |
|---|---|
| tools | {
"listChanged": true
} |
| logging | {} |
| prompts | {
"listChanged": false
} |
| resources | {
"subscribe": false,
"listChanged": false
} |
| extensions | {
"io.modelcontextprotocol/ui": {}
} |
| experimental | {} |
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
| search_ontology_termsB | Search for ontology terms in BioPortal. This function searches across BioPortal ontologies for terms matching the given query. It returns a list of tuples containing the term ID, preferred label, ontology, and ontology URL. |
| search_ontology_propertiesA | Search for ontology properties in BioPortal. This function searches for ontology properties (object properties, annotation properties, datatype properties) by their labels and IDs across BioPortal ontologies. |
| get_ontology_analyticsA | Get visitor analytics for BioPortal ontologies. This function retrieves Google Analytics data for ontology visits. You can get analytics for all ontologies, filter by month/year, or get detailed analytics for a specific ontology. |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |
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