mcp-molecules
Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
| MCP_MOLECULES_ONLINE | No | Set to a falsy value (0/false/no/off) to keep lookups fully offline. Default is enabled. | |
| MCP_MOLECULES_EPA_API_KEY | No | Free CCTE API key for EPA CompTox source. Without it, that source is skipped. |
Capabilities
Features and capabilities supported by this server
| Capability | Details |
|---|---|
| tools | {
"listChanged": false
} |
| prompts | {
"listChanged": false
} |
| resources | {
"subscribe": false,
"listChanged": false
} |
| experimental | {} |
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
| infoA | Report mcp-molecules server availability, version, and environment information. |
| molecular_weight_calculatorA | Compute the molecular weight (molar mass) of a chemical formula. Parses
The Raises |
| isotope_distributionA | Compute the natural isotopic pattern (isotope distribution) of a formula. Returns the set of isotopologue peaks a mass spectrometer would see: each
peak's neutral Peaks below Raises |
| find_chemical_compoundA | Look up a chemical compound by name or molecular formula. Searches the bundled name<->formula database (a PubChem subset) first, then
the writable user cache, then -- unless disabled -- the online fallback
(PubChem, Wikidata, and, when an API key is set, EPA CompTox). A name
resolves to its molecular formula(e); a formula resolves to the compound
name(s) sharing it (isomers), ordered with the preferred name first. The
direction is chosen by Raises |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |
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