grad-agent

An autonomous MCP agent that helps you apply to fully funded MS and PhD programs.

Discover and draft

• Discovers professors on arXiv in your research areas, or deadline-driven per program (run_program_batch)

• Resolves each professor's identity by anchoring on the trigger paper's canonical Semantic Scholar authorId, not the name string — name collisions like "Wei Zhang" are structurally impossible to confuse

• Refuses to draft when identity cannot be anchored; the specific mismatch (e.g. identity ambiguous: 2 comparable candidates, h=40 vs h=38) is persisted to a skipped sheet for audit

• Verifies each candidate is actually faculty (h-index and paper-count gates)

• Filters by region (target_regions: [US, Canada] in your profile; keyword table + homepage TLD + LLM fallback)

• Scrapes their lab page for a recruiting signal + email address

• Matches them to your strongest shipped project (tag overlap + TF-IDF semantic layer + learned response-rate bias)

• Drafts a specific, fact-checked cold email: Claude Haiku writes a hook spanning the prof's recent papers, then a second call verifies every claim against the abstracts and rewrites anything unsupported

• Scores each draft 1 to 10 for fit, with a one-line reason, so you can triage in seconds

• Freshness warnings on every draft: cross-checks the S2 affiliation against the prof's live homepage (flags MISMATCH if they may have moved labs) and flags researchers who have not published in 2+ years

Learn and follow through

• Detects professor replies via read-only IMAP and tags the log automatically

• Learns from outcomes: projects that earn replies rank up in future matching (outcome_report shows what works)

• Drafts follow-up nudges for profs silent 10+ days; never nudges the same prof twice

• Generates an interview prep one-pager when a prof replies: their papers summarised, likely questions, your talking points

Track everything

• Compiles per-school SOPs to PDF (LaTeX), versioned so no draft is ever overwritten

• Tracks outreach, LOR requests, program deadlines, and external scholarships (Mastercard, Commonwealth, Fulbright, Rhodes, and more) in xlsx/yaml

• Emails every draft to your inbox for review; nothing is ever sent to a professor without you

Runs as a stdio MCP server for Claude Code / Claude Desktop / any MCP client, or as a plain CLI.

Published on:

• PyPI: grad-agent

• MCP Registry: io.github.i-ninte/grad-agent

Install

Pick one:

# Recommended for MCP clients (Claude Desktop, Claude Code, etc.)
uvx grad-agent server      # single-shot, no persistent install

# Persistent CLI install
pipx install grad-agent

# Or in a venv
python3 -m venv .venv && source .venv/bin/activate
pip install grad-agent

Related MCP server: pubmed-search-mcp

Set up in 5 minutes

grad-agent init

This writes:

• ~/.grad-agent/profile.yaml — your identity, projects, preferences

• ~/.grad-agent/programs.yaml — target programs (seeded)

• ~/.grad-agent/scholarships.yaml — external scholarships with deadlines (seeded)

• ~/.grad-agent/.env — secrets template

Fill in ~/.grad-agent/.env:

ANTHROPIC_API_KEY=sk-ant-...
SMTP_SERVER=smtp.gmail.com        # presets for Outlook/Yahoo/Zoho in the template
SMTP_PORT=587
SMTP_USERNAME=you@gmail.com
SMTP_PASSWORD=<gmail app password>
SMTP_FROM=you@gmail.com
# Optional:
S2_API_KEY=                       # free Semantic Scholar key, dedicated rate limits
                                  # (client-side throttle already enforces >=1.1s between requests)
IMAP_SERVER=imap.gmail.com        # read-only reply detection; defaults to SMTP creds
GITHUB_USERNAME=your-gh
GITHUB_TOKEN=github_pat_...
HF_USERNAME=your-hf

Fill in the important bits of ~/.grad-agent/profile.yaml:

• name, identity_line, portfolio

• cv_path, transcript_path (absolute paths)

• degree_status: bachelors | masters (drives PhD eligibility gating)

• target_term, target_degree

• research_areas: [nlp, ai4health, ...]

• target_regions: [US, Canada] — only draft for profs in these regions (empty = anywhere)

• seed_projects: 3 to 10 flagship projects with name, pitch, link, tags

Profile edits apply immediately, even while a long-running MCP session is open.

Then:

grad-agent sync        # scan projects (GitHub + HF + local)
grad-agent run         # one batch, drafts land in your inbox

Register with Claude Code

Three commands, in order:

pipx install grad-agent
pipx ensurepath                              # macOS/Linux: opens ~/.local/bin on PATH
                                             # Windows: opens %USERPROFILE%\.local\bin on PATH
claude mcp add grad-agent grad-agent server

On Windows you may need to open a new PowerShell or Terminal window after pipx ensurepath for the PATH change to take effect.

Prefer a zero-install one-liner? Skip pipx and use uvx:

claude mcp add grad-agent uvx grad-agent server

Then in a new Claude Code session:

/mcp

You should see grad-agent connected with ~36 tools. Before it does anything useful, run grad-agent init (or uvx grad-agent init) and fill in ~/.grad-agent/.env and ~/.grad-agent/profile.yaml as described in the setup section above.

If you skipped pipx ensurepath, grad-agent register-claude prints an absolute-path variant of the command that works without PATH changes.

Register with Claude Desktop

Edit ~/Library/Application Support/Claude/claude_desktop_config.json:

{
  "mcpServers": {
    "grad-agent": {
      "command": "uvx",
      "args": ["grad-agent", "server"]
    }
  }
}

The uvx command needs no prior install. If you already ran pipx install grad-agent, you can use "command": "grad-agent", "args": ["server"] instead.

Any other MCP client (Cursor, Zed, Windsurf) uses the same manifest shape; just point them at uvx grad-agent server.

Daily autonomous run

The package ships scheduler templates for all three OSes. grad-agent schedule emits the right one for your platform:

grad-agent schedule --dest .

Then follow the install instructions the command prints. In case you want them up front:

macOS (launchd):

cp com.gradagent.daily.plist ~/Library/LaunchAgents/
launchctl load ~/Library/LaunchAgents/com.gradagent.daily.plist

Linux (systemd user timer, fires at 08:00 local):

mkdir -p ~/.config/systemd/user
cp grad-agent-daily.service grad-agent-daily.timer ~/.config/systemd/user/
systemctl --user daemon-reload
systemctl --user enable --now grad-agent-daily.timer

Windows (Task Scheduler):

# In an elevated PowerShell prompt:
schtasks /Create /TN "grad-agent-daily" /XML .\grad-agent-daily.xml

Or import the XML via the Task Scheduler GUI (Action → Import Task).

Every morning: replies auto-detected via IMAP, follow-up nudges drafted for silent profs, 3 identity-verified faculty leads with fit scores (best fit first), hooks fact-checked against paper abstracts, freshness warnings when a prof's S2 record and live homepage disagree, plus program and scholarship deadline warnings — all in one review email. Skipped leads are persisted with the specific mismatch reason (view with skipped_log_view or open the skipped sheet).

What each MCP tool does

Blog publishing tools (publish_article, update_article, ...) are gated behind blog.enabled: true in profile.yaml and are specific to the author's Turso-backed Next.js portfolio. Most users can ignore them.

What the agent will not do

• Send any email to a professor. Every send is manual, from your Gmail, after you read the draft.

• Touch your inbox beyond reading. IMAP access is read-only: it never sends, deletes, or marks messages.

• Fabricate a paper claim. The hook goes through a second Claude call that rejects any claim not present in the abstracts, and rewrites.

• Email the same professor twice. Deduplication is keyed on the Semantic Scholar authorId, with a name fallback for legacy rows, and follow-ups are marked so no prof is nudged more than once.

• Draft for the wrong person when two profs share a name. Identity is resolved from the trigger paper's authorId, not the name string; ambiguous cases are refused and logged.

• Hide why a lead was rejected. Every skip is persisted to the skipped sheet in outreach_log.xlsx with the stage (identity, faculty-gate, region, dedup, no-papers) and the exact mismatch — not buried in old review emails.

• Exceed Semantic Scholar's rate limit. Client-side throttle enforces ≥1.1s between requests, with exponential backoff on any 429 or 5xx.

• Draft for programs you are ineligible for. If your degree_status is bachelors, PhD programs that require an MSc first are filtered out. Same gate for scholarships outside your eligibility region.

Requirements

• Python 3.10+

• macOS, Linux, or Windows (all three tested in CI on 3.10 / 3.11 / 3.12)

• pdflatex on PATH if you want SOP PDFs (macOS: MacTeX; Ubuntu: texlive-latex-recommended; Windows: MiKTeX)

• Anthropic API key

• Gmail (or another SMTP) for the review-mailer

Where your data lives

Everything is under ~/.grad-agent/ by default, or $GRAD_AGENT_HOME if set:

~/.grad-agent/
  profile.yaml         identity + preferences (regions, seed projects, ...)
  programs.yaml        target programs with eligibility rules + deadlines
  scholarships.yaml    external scholarships with region eligibility + deadlines
  .env                 secrets (gitignored)
  data/
    outreach_log.xlsx  outreach sheet (drafts + outcomes) + skipped sheet (audit trail)
    lor_log.xlsx       recommendation-letter tracker
    catalog.json       synced projects (GitHub + HF + local)
    s2_cache.json      Semantic Scholar lookups (14 day TTL)
    region_cache.json  LLM-inferred regions for unusual affiliations
    db.sqlite          drafts + status
  drafts/              per-school SOP versions + email drafts
    prep/              interview prep one-pagers

Contributing

MIT licensed. PRs welcome for: more program templates, non-Gmail SMTP presets, non-arXiv source adapters, and better prof-verification heuristics.

Author

Kwabena Obeng · i-ninte.github.io/portfolio/