set_probe_geometry
Define electrode contact positions for recordings missing geometry, using standard layouts or custom coordinates, enabling accurate spike sorting and probe visualization.
Instructions
Tell the server where the recording's contacts are, for sessions whose file does not say.
Named layouts: 'utah' (square grid, e.g. 96 contacts at 400 um), 'grid' with n_columns,
'linear' (one column at pitch_um, e.g. a laminar probe), 'tetrode_linear' (groups of four).
'explicit' takes positions_um as [[x, y], ...] in channel order. Geometry is used by
sort_spikes and plot_probe. Contacts under 100 um apart are sorted jointly.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| layout | No | utah | |
| pitch_um | No | ||
| n_columns | No | ||
| session_id | Yes | ||
| positions_um | No |