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Glama
frankmtetwa

thermophysical-curator

by frankmtetwa

Server Configuration

Describes the environment variables required to run the server.

NameRequiredDescriptionDefault

No arguments

Instructions

Guidance the server publishes about itself, which clients place ahead of the tool catalog so the model reads it before choosing anything.

This server publishes no instructions, or was last inspected before Glama recorded them.

Capabilities

Features and capabilities supported by this server

Protocol revision2025-11-25

CapabilityDetails
tools
{
  "listChanged": false
}
prompts
{
  "listChanged": false
}
resources
{
  "subscribe": false,
  "listChanged": false
}
experimental
{}

Tools

Functions exposed to the LLM to take actions

NameDescription
inspect_moleculeC

Validate and canonicalize a SMILES string and report model-domain flags.

predict_jrmpnnB

Predict Tm, Tb, Tc, Pc, and/or Vc with the supplied JR-MPNN checkpoints.

Property symbols are Tm, Tb, Tc, Pc, and Vc. Returned intervals are clearly marked as uncalibrated because the paper's k-NN calibration artifacts are not present in this workspace.

assess_jrmpnn_training_similarityB

Assess similarity to a property's private JR-MPNN training embeddings.

Uses mean Euclidean distance to the 10 nearest graph embeddings. Private Training SMILES, embeddings, and reference identifiers are never returned.

estimate_umansyspropC

Run UManSysProp group-contribution estimates without its legacy web UI.

curate_thermophysical_recordsA

Normalize, deduplicate, score, and triage records with a full audit trail.

Each record should contain smiles, property, value, and unit. Strongly recommended provenance fields are source or doi, experimental, method, and uncertainty. The tool never silently removes a record.

server_capabilitiesB

Describe supported properties, methods, and important scientific limits.

Prompts

Interactive templates invoked by user choice

NameDescription

No prompts

Resources

Contextual data attached and managed by the client

NameDescription

No resources

TDQS

B3.2/5.0

Scored across 6 tools

Disambiguation4/5

Each tool has a distinct role: SMILES validation, JR-MPNN prediction, training-similarity/applicability-domain assessment, UManSysProp estimation, record curation, and a capabilities meta-tool. The two property-prediction tools (predict_jrmpnn and estimate_umansysprop) overlap in output but are clearly separated by method, so mild confusion is possible but descriptions resolve it.

Naming Consistency4/5

Names are uniformly snake_case with clear verb_noun structure (inspect_molecule, predict_jrmpnn, assess_jrmpnn_training_similarity, estimate_umansysprop, curate_thermophysical_records). The lone noun-only server_capabilities is a minor deviation from the verb-led pattern.

Tool Count5/5

Six tools is well-scoped for a thermophysical prediction-and-curation server, with each tool covering a coherent responsibility. No tool feels redundant or missing at the count level.

Completeness4/5

The surface covers the core lifecycle: molecule validation, two prediction paths, applicability-domain assessment, curation with audit trail, and a capabilities descriptor. Batch prediction/curation or result-export operations are not exposed, but the primary workflows are covered without obvious dead ends.

Maintenance

ActivityMaintained
ResponsivenessNo issues