@cyanheads/biorxiv-mcp-server
by cyanheads
Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
| LOGS_DIR | No | Directory for log files (Node.js only). | <project-root>/logs |
| OTEL_ENABLED | No | Enable OpenTelemetry instrumentation. | false |
| MCP_AUTH_MODE | No | Auth mode: none, jwt, or oauth. | none |
| MCP_HTTP_PORT | No | HTTP server port. | 3010 |
| MCP_LOG_LEVEL | No | Log level (debug, info, warning, error, etc.). | info |
| BIORXIV_MAILTO | No | Email address included in the User-Agent header for polite API access per Cold Spring Harbor Lab guidelines. Optional, but recommended. | |
| MCP_TRANSPORT_TYPE | No | Transport: stdio or http. | stdio |
| BIORXIV_API_BASE_URL | No | Override the bioRxiv API base URL. | https://api.biorxiv.org |
| BIORXIV_WEB_BASE_URL | No | Override the bioRxiv website base URL (full-text HTML source for biorxiv_get_fulltext). | https://www.biorxiv.org |
| MEDRXIV_WEB_BASE_URL | No | Override the medRxiv website base URL (full-text HTML source for biorxiv_get_fulltext). | https://www.medrxiv.org |
| EUROPEPMC_API_BASE_URL | No | Override the EuropePMC base URL. | https://www.ebi.ac.uk/europepmc/webservices/rest |
| MCP_HTTP_ENDPOINT_PATH | No | HTTP endpoint path. | /mcp |
Capabilities
Server capabilities have not been inspected yet.
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
No tools | |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |
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