sharp-on-fhir-mcp
README.md
# Featherless
<img width="2124" height="1344" alt="image (4)" src="https://github.com/user-attachments/assets/55dc0b64-8ba3-4c69-b193-59c60287068d" />
> A clean-room **[SHARP-on-MCP](https://www.sharponmcp.com)** compliant FHIR R4
> MCP server with interactive **[MCP-UI](https://github.com/idosal/mcp-ui)** clinical dashboards.
Built for the **Prompt Opinion "Build the Future of Healthcare AI" Hackathon** โ a
vendor-neutral MCP server that any SMART-on-FHIR app, agent, or LLM host can
plug into without server-side OAuth, API keys, or proprietary auth flows.
---
## Why SHARP?
The [SHARP](https://www.sharponmcp.com/overview.html) (Standardised Healthcare
Agent Remote Protocol) spec describes a **headers-based context model** for MCP
servers in healthcare:
| Header | Purpose |
| ----------------------- | --------------------------------------------- |
| `X-FHIR-Server-URL` | Base URL of the patient's FHIR R4 endpoint |
| `X-FHIR-Access-Token` | Bearer token already minted by the agent host |
| `X-Patient-ID` | Optional default `Patient` resource id |
Per SHARP ยง3.2, **the MCP server never runs an OAuth dance itself**. The agent
host (e.g. a SMART-on-FHIR launch container) obtains the token and forwards it
on every call. This means a single deployment of this server works against
**Epic, Cerner, MEDITECH, athenahealth, eClinicalWorks, ConnectEHR, HAPI**, or
any other FHIR R4 endpoint โ there's nothing vendor-specific.
The server advertises `capabilities.experimental.fhir_context_required = true`
on every initialise response so SHARP-aware clients know to forward those
headers automatically.
---
## What's included
### ๐ฉบ Clinical FHIR tools
* `fhir_get_capability_statement` โ discover the connected FHIR server
* `fhir_get_patient`, `fhir_search`, `fhir_read`, `fhir_patient_everything` โ generic R4 access
* `clinical_search_patients`, `clinical_get_patient_summary`
* `clinical_get_appointments`, `clinical_get_encounters`
* `clinical_get_problems`, `clinical_get_medications`, `clinical_get_allergies`, `clinical_get_immunizations`
* `clinical_get_health_record` โ one-shot consolidated record
* `clinical_get_context` โ full visit context (demographics + allergies + meds + problems + labs + vitals + encounters + alerts) in parallel
### ๐ฌ Labs, vitals & imaging
* `lab_get_results`, `lab_get_vital_signs`, `lab_get_diagnostic_reports`
* `imaging_get_documents` โ DocumentReference search
### ๐ง Optional persistent clinical memory (mem0)
Backed by [mem0](https://github.com/mem0ai/mem0) (Apache-2.0). mem0 is
embedded as a Python library โ no separate service or database. Memory
state persists in a Docker volume (`mem0_data`).
mem0 is text-only at the storage layer, but is well-suited to clinical
narrative use (encounters, alerts, notes, transcripts). For non-text
inputs (radiology films, audio dictation, video clips), the agent host
should pre-process โ caption images via a VLM, transcribe audio with
Whisper, summarise video โ and persist the resulting *text* via
`memory_store_note`. This keeps memory cleanly searchable and lets each
host pick the right model per modality.
Available when `OPENAI_API_KEY` (or `OPENAI_API_BASE` for an OpenAI-compat
provider) is set, and `MEM0_DISABLED` is not `1`:
* `memory_store_encounter` โ visit summary with diagnoses, plan, complaint
* `memory_store_alert` โ persistent clinical flag (allergy, drug interaction, โฆ)
* `memory_store_note` โ free-text note (use for VLM/Whisper outputs)
* `memory_search_history` โ semantic search scoped to current patient
* `memory_get_patient_history` โ list memories for the patient
* `memory_delete` โ remove a single memory by id
* `memory_reset_patient` โ wipe all memories for one patient (irreversible)
### ๐ MCP-UI visualisations
* `visualize_lab_trend` โ Chart.js line chart of one lab over time
* `visualize_vitals` โ multi-chart vitals dashboard
* `visualize_patient_dashboard` โ full HTML clinical page (demographics, alerts, allergies, meds, problems, labs, encounters, immunisations + Chart.js trends)
All visual tools return MCP-UI `ui://` resources that the host renders in its inspector pane.
---
## Quickstart
### 1. Install
```bash
git clone https://github.com/your-org/sharp-fhir-mcp.git
cd sharp-fhir-mcp
pip install -e .
```
### 2. Run the server
```bash
sharp-fhir-mcp # http (streamable) on 0.0.0.0:8000
sharp-fhir-mcp --port 9000 # custom port
SHARP_STRICT_CONTEXT=1 sharp-fhir-mcp # reject calls missing FHIR headers
```
The MCP endpoint is `http://localhost:8000/mcp`.
For the full stack (FHIR MCP server + embedded mem0 memory) use the
one-shot bring-up script โ it handles the broken-`docker`-symlink case
(common after migrating off OrbStack), seeds `.env` if missing, optionally
prunes build cache, and starts the stack detached:
```bash
./scripts/start.sh # build + start, detached
./scripts/start.sh --no-memory # disable mem0 (memory_* tools omitted)
./scripts/start.sh --logs # follow logs after start
./scripts/start.sh --prune --build # free disk + rebuild from scratch
./scripts/start.sh --down # tear down + remove memory volume
```
Or run compose directly:
```bash
cp .env.example .env # set OPENAI_API_KEY (or OPENAI_API_BASE)
docker compose up --build -d
```
> **Note:** `localhost` here refers to localhost of the machine where you are
> running the server. To access it remotely, deploy the server (see below) or
> port-forward to your local instance.
### 3. Connect from any SHARP-aware MCP client
Send these headers on every JSON-RPC request:
```http
X-FHIR-Server-URL: https://hapi.fhir.org/baseR4
X-FHIR-Access-Token: <bearer token from your SMART launch>
X-Patient-ID: 12345 # optional
```
### 4. Try a public sandbox without writing a SMART app
The HAPI public FHIR R4 sandbox is read-only and **does not require auth** โ
useful for kicking the tires:
```bash
curl -X POST http://localhost:8000/mcp \
-H 'Content-Type: application/json' \
-H 'Accept: application/json, text/event-stream' \
-H 'X-FHIR-Server-URL: https://hapi.fhir.org/baseR4' \
-H 'X-FHIR-Access-Token: anonymous' \
-d '{"jsonrpc":"2.0","id":1,"method":"tools/list"}'
```
---
## Deployment
### Vercel (Python serverless)
This server runs as a stateless Streamable-HTTP endpoint, which works on
Vercel out of the box. You can re-use an existing
[Next.js MCP scaffold](https://model-context-protocol-mcp-with-nex-indol-ten.vercel.app/)
by either:
1. **Adding the Python ASGI handler** โ drop the `app` Starlette instance
into `api/index.py`:
```python
# api/index.py
from sharp_fhir_mcp.server import app # noqa: F401
```
plus a minimal `vercel.json`:
```json
{
"builds": [{"src": "api/index.py", "use": "@vercel/python"}],
"routes": [{"src": "/(.*)", "dest": "api/index.py"}]
}
```
2. **Or running it as a sidecar** behind your existing Vercel front-end and
reverse-proxying `/mcp` to a longer-lived host (Fly.io, Railway, Render).
The server respects the Vercel-injected `PORT` environment variable.
### Local development
```bash
cp .env.example .env # set FHIR_SERVER_URL etc. for fallbacks
sharp-fhir-mcp # http://localhost:8000/mcp
```
### Docker / docker-compose
A single-service stack: the FHIR MCP server runs in one container and
embeds mem0 as a library.
```bash
cp .env.example .env
# Set OPENAI_API_KEY (or OPENAI_API_BASE for an OpenAI-compat provider:
# OpenRouter, Ollama OpenAI-mode, vLLM, LM Studio, Together).
docker compose up --build
```
* MCP endpoint: `http://localhost:8000/mcp`
* Persistent memory volume: `mem0_data` (mounted at `/data` in container)
#### Local LLM + embeddings (no OpenAI calls)
Point both the LLM and embedder at a local Ollama:
```bash
OPENAI_API_BASE=http://host.docker.internal:11434/v1
MEM0_LLM_PROVIDER=ollama
MEM0_LLM_MODEL=llama3.1
MEM0_EMBED_PROVIDER=ollama
MEM0_EMBED_MODEL=nomic-embed-text
```
#### Disabling memory
Pass `MEM0_DISABLED=1` (or `./scripts/start.sh --no-memory`) to skip mem0
entirely. The FHIR/clinical/lab/visualisation tools still work; only the
`memory_*` tools are omitted.
---
## Architecture
```
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โ MCP Client / Agent / LLM host (Claude, Cursor, custom) โ
โ โข Knows the patient's FHIR endpoint + access token โ
โ โข Sends X-FHIR-Server-URL, X-FHIR-Access-Token headers โ
โโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โ Streamable HTTP (SHARP-on-MCP)
POST /mcp + JSON-RPC + SHARP headers
โผ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โ featherless-mcp <img width="2124" height="1344" alt="image (10)" src="https://github.com/user-attachments/assets/81e48473-20b9-41ac-a485-8e1116bb7ffc" />
โ
โ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โ โ SharpContextMiddleware โ โ
โ โ โข Parses X-FHIR-Server-URL / X-FHIR-Access-Token โ โ
โ โ โข Stores in ContextVar for the request scope โ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โ โผ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โ โ FastMCP tool registry โ โ
โ โ โโ fhir_* (generic R4 search/read) โ โ
โ โ โโ clinical_* (patient/encounter/medication/โฆ) โ โ
โ โ โโ lab_* / imaging_*(observations, reports, docs) โ โ
โ โ โโ memory_* (optional, embedded mem0) โ โ
โ โ โโ visualize_* (MCP-UI Chart.js dashboards) โ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โ โผ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โ โ Vendor-neutral FHIR R4 client (httpx, async) โ โ
โ โโโโโโโโโโโโโโโโโโโโโโโโโโโฌโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ โ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโผโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โผ
FHIR R4 server (Epic / Cerner / HAPI / โฆ)
```
See [`CLAUDE.md`](./CLAUDE.md) for detailed module-by-module notes and the
SHARP compliance check-list.
---
## SHARP compliance check-list
| Requirement | Status |
| ------------------------------------------------------------- | :----: |
| Streamable-HTTP transport (stdio not in scope) | โ
|
| Read FHIR endpoint from `X-FHIR-Server-URL` header | โ
|
| Read bearer token from `X-FHIR-Access-Token` header | โ
|
| Optional `X-Patient-ID` header for default patient context | โ
|
| Advertise `capabilities.experimental.fhir_context_required` | โ
|
| No server-side OAuth / token storage | โ
|
| Vendor-neutral FHIR R4 client | โ
|
| Structured `fhir_context_required` errors when headers absent | โ
|
| Optional strict context enforcement (`SHARP_STRICT_CONTEXT=1`) | โ
|
---
## License
MIT โ see `LICENSE`.