Skip to main content
Glama
KyleVick4

ryogena-pubmed-mcp

by KyleVick4

Server Configuration

Describes the environment variables required to run the server.

NameRequiredDescriptionDefault
NCBI_EMAILNoOptional email address recommended by NCBI for better service.
NCBI_API_KEYNoOptional API key to raise rate limit from 3 to 10 requests per second.

Capabilities

Features and capabilities supported by this server

CapabilityDetails
tools
{
  "listChanged": false
}
prompts
{
  "listChanged": false
}
resources
{
  "subscribe": false,
  "listChanged": false
}
experimental
{}

Tools

Functions exposed to the LLM to take actions

NameDescription
search_pubmedA

Search PubMed and return slim metadata for each hit.

Two-step under the hood: esearch gets PMIDs, esummary gets title/authors/journal/pubdate/DOI for each. Use fetch_article next when you need the full abstract for a specific result.

fetch_articleA

Fetch one article with full abstract text.

Returns title, abstract (with section labels preserved if structured), authors, journal, pubdate, DOI, and a clickable PubMed URL. Returns {"error": "NOT_FOUND"} if the PMID is invalid.

find_relatedA

Walk the PubMed citation neighbor graph from one PMID.

NCBI's "related articles" use a probabilistic topic-similarity model over title/abstract/MeSH. Returns slim metadata for each neighbor. Useful for "what else should I read about this paper?" follow-ups.

search_by_authorA

Find an author's PubMed-indexed publications.

Wraps search_pubmed with the [au] field qualifier so partial-name matches don't pollute the result. Newest-first by default — flip sort to 'relevance' to surface most-cited / highest-impact first.

Prompts

Interactive templates invoked by user choice

NameDescription

No prompts

Resources

Contextual data attached and managed by the client

NameDescription

No resources

Latest Blog Posts

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/KyleVick4/pubmed-mcp'

If you have feedback or need assistance with the MCP directory API, please join our Discord server