wadachi
Stores the memory brain as a markdown LLM Wiki that can be opened as an Obsidian vault for human-readable and editable knowledge.
Your AI forgets everything between sessions. Wadachi fixes that.
Wadachi (轍): the tracks wheels leave in a road — formerly known as Engram.
The MCP-native memory server for the LLM Wiki pattern.
Persistent memory + semantic search for Claude Code, Claude Desktop, Cursor, and any MCP client.
Live demo → · docs + an interactive constellation over a fictional sample brain
The Problem
Every time you open Claude Code on a project, it starts from zero. It re-reads files, re-analyzes architecture, re-discovers patterns — burning tokens and time on things it already figured out yesterday.
You end up repeating yourself:
"Remember, we're using the observer pattern here..."
"The deploy script needs the --feynotes flag..."
"We already tried that approach, it doesn't work because..."
Related MCP server: auxly-memory-cli
The Solution
Wadachi gives your AI a persistent brain — a local knowledge base where it stores insights, decisions, and patterns, then retrieves them instantly at the start of every session.
One tool call at session start. All relevant context loaded. Zero wasted tokens re-discovering.
How it works
Connect —
wadachi initwires the server into Claude Code (and Antigravity) automatically; any MCP client works.Register your projects — filesystem paths mapped to project names, so memories land in the right scope.
Start with context — every session opens with
get_context: relevant memories, recent decisions, what needs review.Store as you go — bugs, configs, patterns, decisions get saved the moment they're figured out. The brain compounds.
Features
Persistent Memory — Knowledge stored as markdown files with SQLite metadata. Survives across sessions, searchable, human-readable.
Semantic Search — Finds memories by meaning, not just keywords. Ask for "linearizzazione sistemi" and it finds your notes on equilibrium points, even if the word "linearizzazione" never appears in them. Powered by local embeddings via fastembed — no API calls, no costs, runs on your machine.
Project Profiles — Register your projects with their filesystem paths. Wadachi auto-detects which project you're in and scopes memories accordingly. Your FeyNotes memories stay separate from your LaPlacebo memories.
Auto-Context — get_context is the killer tool: one call at session start that detects the project, gathers relevant memories, loads recent decisions, and returns everything your AI needs to hit the ground running.
Decision Log — Not just what you know, but what you decided and why. When a future session faces the same choice, it sees the rationale and the rejected alternatives — no more re-debating solved problems.
Constellation — Graph-Aware Recall — Plain recall is pure cosine top-k, so a memory that's strongly connected to your query but not textually similar never surfaces. Wadachi builds a weighted graph over your brain from citation edges ("memoria #82", "aggiorna #77" parsed from the prose), semantic k-NN edges, and shared-entity edges, then runs HippoRAG-style spreading activation (Personalized PageRank). recall_associative pulls up neighbours of your best hits even when their raw similarity is low — and returns the plain-cosine baseline alongside, so you can compare.
Entity Knowledge Graph (Graphify) — Extracts the entities inside your notes (convert.py, Di Gennaro, Opus 4.8) and the relations between them, linking memories that mention the same thing even when neither cites the other. Extraction runs through the local claude CLI — it uses your Claude plan, not metered API, so it costs $0 — and degrades gracefully when not installed.
Belief Revision — A plain store treats every memory as true forever; a brain shouldn't. review_beliefs does a read-only pass that flags memories likely gone stale — superseded by a newer note, past a temporal deadline ("resets 1 Jul"), or provisional/fallback wording — and annotates them in recall instead of silently trusting them. It never deletes: it suggests, you confirm with flag_stale / set_belief. Every update is non-destructive, so prior versions stay recoverable via memory_history.
Reflection & Insights — The brain thinks between sessions. reflect combines memories to surface cross-project analogies and non-obvious connections that no single memory holds — reusing the entity graph it already built, so no extra LLM cost. Candidates are proposed, never auto-trusted: you accept_insight (promoted to a real linked memory) or reject_insight.
Procedural Memory — Recency-ranked recall can hide the right rule and let you repeat a mistake twice. review_procedures clusters recurring incident memories by root theme and proposes a single always-on rule for review — human-in-the-loop, it never rewrites your operating instructions itself.
Quick Start
Three commands and your AI has a memory:
# 1 · install (pipx or uv — semantic search included, runs locally)
pipx install "wadachi[semantic]" # or: uv tool install "wadachi[semantic]"
# 2 · guided setup: brain dir, database, Claude Code registration
wadachi init
# 3 · restart Claude Code — every session now starts with get_contextwadachi init creates the brain directory (default ~/.wadachi), brings the
database to the latest schema, and registers the MCP server in Claude Code and
Antigravity automatically. It is idempotent — safe to re-run anytime.
git clone https://github.com/EliaCinti/wadachi.git
cd wadachi
pip install -e ".[semantic]"
wadachi initClaude Code — ~/.claude.json or project-level .mcp.json:
{
"mcpServers": {
"wadachi": {
"command": "wadachi",
"args": [],
"env": {
"BRAIN_DIR": "/Users/you/.wadachi"
}
}
}
}Claude Desktop — ~/Library/Application Support/Claude/claude_desktop_config.json:
{
"mcpServers": {
"wadachi": {
"command": "wadachi",
"args": []
}
}
}Cursor — .cursor/mcp_servers.json:
{
"mcpServers": {
"wadachi": {
"command": "wadachi",
"args": []
}
}
}Register a project
In your first Claude session with Wadachi connected:
Register my project "feynotes" with description "Lecture audio to interactive web pages"
and path "/Volumes/ExtremeSSD/University/Lecture_From_Audio/"Use it
From now on, every session can start with get_context and your AI already knows what's going on. As you work, important discoveries get stored automatically. Over time, the brain compounds — each session is smarter than the last.
Tools
Wadachi exposes 31 MCP tools, grouped by area.
Memory
Tool | What it does |
| Save an insight, pattern, fix, or reference for future sessions. |
| Load the full content of a specific memory by ID. |
| Browse all memories. Filter by project or category. |
| Modify a memory's content or tags — non-destructive, prior versions kept. |
| Permanently remove a memory. |
| Show prior versions of a memory (preserved on every update). |
Search & Context
Tool | What it does |
| Start here. Auto-detects project, returns relevant memories + decisions + stats + what needs review. |
| Semantic (or keyword) search across stored knowledge, annotated with belief status. |
| Drill down from the compact context: full content of one or more memories by id. |
| Health check, search mode, stats, and registered projects. |
Decisions
Tool | What it does |
| Log a decision with rationale and rejected alternatives. |
| Browse the decision history. |
Projects
Tool | What it does |
| Map filesystem paths to a project name for auto-detection. |
| Show all registered projects. |
Constellation — Graph
Tool | What it does |
| Spreading-activation recall over the memory graph (HippoRAG-style PPR); returns the cosine baseline too. |
| Show the memories most strongly linked to a given one (typed neighbours). |
| Graph overview: hubs, orphans, components, a Mermaid backbone + the entity graph. |
| (Re)build the Graphify entity knowledge graph via the local |
Belief Revision
Tool | What it does |
| Read-only scan for memories likely gone stale (superseded / temporal / provisional). |
| Update a memory's belief envelope: confidence, status, validity, supersession. |
| Mark a memory stale — kept and recoverable, but annotated in recall. |
Reflection & Insights
Tool | What it does |
| Surface cross-project analogies and non-obvious connections as proposed insights. |
| List reflection insights by status (proposed / accepted / rejected). |
| Accept an insight and promote it to a real memory linked to its sources. |
| Reject an insight (kept on record, marked rejected). |
Procedural Memory
Tool | What it does |
| Cluster recurring incidents and propose always-on rules for review (read-only). |
Consolidation
Tool | What it does |
| Propose groups of redundant memories to merge (read-only, you review). |
| Store your synthesis as a new memory; sources marked superseded, never deleted. |
| The brain's sleep: graph communities → merge candidates, fading leaves → decay candidates. Read-only. |
Provenance & Time
Tool | What it does |
| Ask "why do we use X and not Y?" — decision, rationale, rejected alternatives, and the memories that cite it. |
| Time-travel: what the brain believed at a date, with content reconstructed from version history. |
Memory Categories
Category | Use for |
| System design, structure, high-level patterns |
| Bugs found and their solutions |
| Setup details, environment variables, infrastructure |
| Code conventions, recurring patterns, style rules |
| General project background and context |
| API details, library usage, external documentation |
| Everything else |
Storage
All data lives locally in ~/.wadachi (configurable via BRAIN_DIR env var; a legacy ~/.engram dir keeps working):
~/.wadachi/
├── brain.db # SQLite: metadata + cached embeddings
├── global/ # Cross-project knowledge
│ ├── python-venv-tips.md
│ └── git-workflow.md
└── projects/
├── feynotes/
│ ├── pipeline-architecture.md
│ ├── katex-gotchas.md
│ └── deploy-workflow.md
└── laplacebo/
└── solver-design.mdMemories are plain markdown files with YAML frontmatter — readable and editable by hand.
LLM Wiki native · Obsidian vault · OKF bundle
The brain follows Karpathy's LLM Wiki pattern:
an agent-maintained markdown wiki with [[wikilinks]], a generated index.md
catalog, an append-only log.md, and a SCHEMA.md documenting the conventions
(edit it — the schema file is yours). Every link becomes a graph edge that
associative recall and consolidation travel on.
Obsidian: the brain dir is a vault — open it and get the graph view for free. Zero lock-in.
OKF: every file carries the Open Knowledge Format
typefield — the brain is a conformant OKF bundle, portable to any OKF consumer.wadachi doctor --fixupgrades pre-OKF brains in place (content never touched).
Upgrading
Your memories always survive an upgrade. The database schema is versioned:
on first start after an update, wadachi applies any pending migrations — and
backs up your brain.db automatically (to <brain>/backups/) before
touching anything. Existing brains from older versions (including the Engram
era, ~/.engram) are adopted in place: nothing to export, nothing to lose.
wadachi export # optional but wise: read-only portable snapshot first
pipx upgrade wadachi # or: uv tool upgrade wadachi
# restart Claude Code — migrations (if any) run on first start, after a backupwadachi export never touches the brain (no migrations run) — safe even on a
pre-wadachi Engram brain. wadachi restore <archive> --to <dir> brings it back somewhere new; --replace swaps the active brain (safety-exporting the current state first).
Search Modes
Wadachi ships with two search backends:
Mode | Install | How it works | Speed |
Semantic |
| Local embeddings + cosine similarity. Finds by meaning. | ~50ms |
Keyword | Built-in | Token overlap scoring on title + tags + content. | ~5ms |
Semantic search runs entirely on your machine — no API calls, no cloud, no costs. The embedding model (BAAI/bge-small-en-v1.5, ~33M params) downloads once and runs locally.
Recently shipped
Constellation — graph-aware associative recall (citation + semantic + entity edges, HippoRAG-style spreading activation)
Graphify entity graph — entity/relation extraction over the brain via the local
claudeCLI ($0)Belief revision — stale / superseded / temporal flagging, annotated in recall, non-destructive
Reflection & insights — cross-memory analogies proposed for accept/reject
Procedural memory — recurring-incident clustering into candidate rules
Non-destructive memory history — every update preserves prior versions
Web graph visualizer — interactive constellation view, live at wadachi.eliacinti.dev
Roadmap
Auto-summarize old memories to reduce token usage
Memory importance decay (surface recent and frequently-accessed memories first)
Claude Code hooks for automatic context injection + brain backup on session stop
Export/sync with Notion
Conversation history indexing
Multi-language embedding model for better Italian support
Contributing
PRs welcome — read CONTRIBUTING.md first (philosophy: local-first, memories are sacred, propose don't auto-edit). Not a coder? The most valuable contribution is telling us how you use wadachi — there's no telemetry, feedback is all we have.
Acknowledgments
Inspired by mstrehse/mcp-brain — a Go-based MCP memory server that sparked the idea. Wadachi is a ground-up rewrite in Python with semantic search, project awareness, and auto-context injection.
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