neurochat
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- AlicenseNot gradedqualityAmaintenanceEnables a connected LLM to inspect brain MRI slices as crops and montages with coordinates, compare a region against its mirrored hemisphere, and review the pipeline's candidate hotspots. It lets the model write prioritised "area to review" annotations that appear live in the browser viewer, and move or read the clinician's crosshair position.MIT
- FlicenseAqualityBmaintenanceExposes NeuroGraph's scientific API to AI models as MCP tools, enabling them to query, analyze, and visualize brain networks — regions, tracts, connectivity, literature, and cross-species homologies — drawn from a portable SSD-based neuroimaging data library. Lets models read real atlas data, load datasets, compute graph metrics, and produce visualization scene descriptors without acting as the scientific engine itself.123-
- AlicenseNot gradedqualityAmaintenanceEnables LLMs to build and explore a cognitive neuroscience-inspired knowledge graph with SQLite, supporting search, graph traversal, temporal sequences, and structured reasoning.24MIT
- FlicenseBqualityBmaintenanceEnables LLM agents to programmatically inspect hardware resources, run in-memory inference benchmarks, list supported fMRI studies, and retrieve cortical and subcortical atlas region indices via JSON-RPC 2.0.4-
- AlicenseNot gradedqualityDmaintenanceA natural language interface for the Brain knowledge management system, enabling conversational interactions, intelligent workflows, and tool suggestions.1MIT
- AlicenseNot gradedqualityBmaintenanceEnables AI coding agents to perform end-to-end medical image analysis locally, from inspecting CT/MRI/X-ray studies and running containerized segmentation models like MedSAM2, TotalSegmentator, and HD-BET to refining masks, measuring volumes, and writing reports. It pairs preset or custom guideline protocols with a code-customizable viewer that renders images back to agents as annotated PNGs and to humans as interactive HTML.2Apache 2.0
TDQS
Scored across 10 tools
Each tool has a clearly distinct purpose: loading atlases and volumes, listing regions, navigating, display settings, overlays, ROI statistics, volume arithmetic, screenshots, and script export. No two tools could be confused.
All tool names follow a consistent verb_noun pattern in snake_case (e.g., load_atlas, list_regions, compare_volumes). Even 'screenshot' is a common noun-as-verb, fitting the pattern. No mixing of styles.
With 10 tools covering loading, exploration, visualization, statistics, comparison, and export, the set is well-scoped for neuroimaging analysis. Each tool earns its place without unnecessary redundancy.
The tools cover core workflows: data loading, region inspection, navigation, display, statistics, and script export. Minor gaps exist, such as missing histogram or filtering capabilities, but the surface is sufficient for reproducible exploration.