ProteinAtlas MCP Server
Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
No arguments | |||
Instructions
Guidance the server publishes about itself, which clients place ahead of the tool catalog so the model reads it before choosing anything.
This server publishes no instructions, or was last inspected before Glama recorded them.
Capabilities
Server capabilities have not been inspected yet.
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
| search_proteinsC | Search Human Protein Atlas for proteins by name, gene symbol, or description |
| get_protein_infoB | Get detailed information for a specific protein by gene symbol |
| get_protein_by_ensemblC | Get protein information using Ensembl gene ID |
| get_tissue_expressionC | Get tissue-specific expression data for a protein |
| search_by_tissueC | Find proteins highly expressed in specific tissues |
| get_blood_expressionC | Get blood cell expression data for a protein |
| get_brain_expressionC | Get brain region expression data for a protein |
| get_subcellular_locationC | Get subcellular localization data for a protein |
| search_by_subcellular_locationC | Find proteins localized to specific subcellular compartments |
| get_pathology_dataB | Get cancer and pathology data for a protein |
| search_cancer_markersC | Find proteins associated with specific cancers or with prognostic value |
| get_antibody_infoB | Get antibody validation and staining information for a protein |
| advanced_searchC | Perform advanced search with multiple filters and criteria |
| batch_protein_lookupC | Look up multiple proteins simultaneously |
| compare_expression_profilesC | Compare expression profiles between multiple proteins |
| get_protein_classesC | Get protein classification and functional annotation data |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |
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