from scmcp_shared.mcp_base import BaseMCPManager
from scmcp_shared.server.preset import ScanpyIOMCP
from scmcp_shared.server.preset import ScanpyPreprocessingMCP
from scmcp_shared.server.preset import ScanpyToolsMCP
from scmcp_shared.server.preset import ScanpyPlottingMCP
from .util import ul_mcp
from scmcp_shared.server.auto import auto_mcp
from scmcp_shared.server.code import nb_mcp
class ScanpyMCPManager(BaseMCPManager):
"""Manager class for Scanpy MCP modules."""
def init_mcp(self):
"""Initialize available Scanpy MCP modules."""
self.available_modules = {
"io": ScanpyIOMCP().mcp,
"pp": ScanpyPreprocessingMCP().mcp,
"tl": ScanpyToolsMCP().mcp,
"pl": ScanpyPlottingMCP().mcp,
"ul": ul_mcp,
"auto": auto_mcp,
"nb": nb_mcp
}
