Medplum

// SPDX-FileCopyrightText: Copyright Orangebot, Inc. and Medplum contributors // SPDX-License-Identifier: Apache-2.0 import type { CodeSystem } from '@medplum/fhirtypes'; import { initAppServices, shutdownApp } from '../../app'; import { loadTestConfig } from '../../config/loader'; import { DatabaseMode, getDatabasePool } from '../../database'; import { withTestContext } from '../../test.setup'; import { getSystemRepo } from '../repo'; describe('Coding lookup table', () => { const systemRepo = getSystemRepo(); beforeAll(async () => { const config = await loadTestConfig(); await initAppServices(config); }); afterAll(async () => { await shutdownApp(); }); test('Indexes codings from complete CodeSystem resource', () => withTestContext(async () => { const codeSystem: CodeSystem = { resourceType: 'CodeSystem', status: 'active', content: 'complete', url: 'http://example.com/complete-code-system', concept: [ { code: 'AB', display: 'Ambulance' }, { code: 'CD', display: 'Cardiology', concept: [{ code: 'F', display: 'Fibrillation' }] }, { code: 'E', display: 'Emergency' }, ], }; const systemResource = await systemRepo.createResource(codeSystem); const db = getDatabasePool(DatabaseMode.READER); const results = await db.query('SELECT id, code, display FROM "Coding" WHERE system = $1', [systemResource.id]); expect(results.rows.map((r) => `${r.code} (${r.display})`).sort()).toStrictEqual([ 'AB (Ambulance)', 'CD (Cardiology)', 'E (Emergency)', 'F (Fibrillation)', ]); const codingId = results.rows.find((r) => r.code === 'F').id; const properties = await db.query('SELECT target FROM "Coding_Property" WHERE coding = $1 AND value = $2', [ codingId, 'CD', ]); expect(properties.rowCount).toStrictEqual(1); const targetId = results.rows.find((r) => r.code === 'CD').id; expect(properties.rows[0].target).toStrictEqual(targetId); })); test('Omits codings from incomplete CodeSystem resource', () => withTestContext(async () => { const codeSystem: CodeSystem = { resourceType: 'CodeSystem', status: 'active', content: 'fragment', url: 'http://example.com/partial-code-system', concept: [ { code: 'AB', display: 'Ambulance' }, { code: 'CD', display: 'Cardiology', concept: [{ code: 'F', display: 'Fibrillation' }] }, { code: 'E', display: 'Emergency' }, ], }; const systemResource = await systemRepo.createResource(codeSystem); const db = getDatabasePool(DatabaseMode.READER); const results = await db.query('SELECT code, display FROM "Coding" WHERE system = $1', [systemResource.id]); expect(results.rowCount).toStrictEqual(0); })); });