Medplum

// SPDX-FileCopyrightText: Copyright Orangebot, Inc. and Medplum contributors // SPDX-License-Identifier: Apache-2.0 import type { WithId } from '@medplum/core'; import { readJson } from '@medplum/definitions'; import type { BundleEntry, Resource, SearchParameter, StructureDefinition } from '@medplum/fhirtypes'; import { readFileSync, writeFileSync } from 'node:fs'; import { resolve } from 'node:path'; const resourceTypes = [ 'Address', 'Patient', 'Organization', 'Practitioner', 'Encounter', 'DiagnosticReport', 'Observation', 'PlanDefinition', 'ActivityDefinition', 'Questionnaire', 'QuestionnaireResponse', 'ServiceRequest', 'Specimen', 'Bot', 'Project', 'Communication', 'SpecimenDefinition', 'ObservationDefinition', 'Media', 'Schedule', 'Task', 'Slot', ]; const properties = [ 'resourceType', 'name', 'snapshot', 'element', 'id', 'path', 'min', 'max', 'type', 'code', 'targetProfile', 'valueSet', 'address', 'city', 'action', 'base', 'expression', 'component', 'referenceRange', 'contentReference', ]; const searchParams = [ 'Patient-name', 'Patient-birthdate', 'Patient-organization', 'Patient-active', 'individual-telecom', 'individual-email', 'individual-phone', 'individual-address-city', 'individual-address-state', 'ServiceRequest-subject', 'ServiceRequest-authored', 'Observation-value-quantity', 'Observation-value-string', 'Encounter-length', 'Communication-encounter', 'Communication-part-of', 'Media-encounter', 'Questionnaire-name', 'Questionnaire-url', 'ActivityDefinition-name', 'Schedule-identifier', 'Task-identifier', 'Slot-schedule', 'Slot-start', 'Measure-url', ]; const USCoreStructureDefinitionFiles = [ 'StructureDefinition-us-core-patient.json', 'StructureDefinition-us-core-race.json', 'StructureDefinition-us-core-ethnicity.json', 'StructureDefinition-us-core-birthsex.json', 'StructureDefinition-us-core-genderIdentity.json', 'StructureDefinition-us-core-implantable-device.json', 'StructureDefinition-us-core-blood-pressure.json', 'StructureDefinition-us-core-medicationrequest.json', ]; const BUILD_USCORE = false; export function main(): void { writeStructureDefinitions(); writeSearchParameters(); if (BUILD_USCORE) { // To build USCore, download and expand a USCore Implementation Guide package file, // such as https://hl7.org/fhir/us/core/STU5.0.1/package.tgz which is linked to // from https://hl7.org/fhir/us/core/STU5.0.1/downloads.html buildUSCoreStructureDefinitions('/absolute/path/to/expanded/package-file', [ resolve(import.meta.dirname, '../../mock/src/mocks/uscore/uscore-v5.0.1-structuredefinitions.json'), resolve(import.meta.dirname, '../../definitions/dist/fhir/r4/testing/uscore-v5.0.1-structuredefinitions.json'), ]); } } function writeStructureDefinitions(): void { const output: StructureDefinition[] = []; addStructureDefinitions('fhir/r4/profiles-resources.json', output); addStructureDefinitions('fhir/r4/profiles-medplum.json', output); writeFileSync( resolve(import.meta.dirname, '../../mock/src/mocks/structuredefinitions.json'), JSON.stringify(output, keyReplacer, 2), 'utf8' ); } function addStructureDefinitions(fileName: string, output: StructureDefinition[]): void { const entries = readJson(fileName).entry as BundleEntry<WithId<StructureDefinition>>[]; for (const entry of entries) { const resource = entry.resource as WithId<Resource>; if (resource.resourceType === 'StructureDefinition' && resourceTypes.includes(resource.id)) { removeBaseFromElements(resource); output.push(resource); } } } function removeBaseFromElements(sd: StructureDefinition): void { for (const element of sd.snapshot?.element ?? []) { if ( element.base && element.path === element.base.path && element.min === element.base.min && element.max === element.base.max ) { element.base = undefined; } } } function writeSearchParameters(): void { const output: SearchParameter[] = []; for (const entry of readJson('fhir/r4/search-parameters.json').entry as BundleEntry<SearchParameter>[]) { const resource = entry.resource as WithId<SearchParameter>; if (searchParams.includes(resource.id)) { output.push(resource); } } for (const entry of readJson('fhir/r4/search-parameters-medplum.json').entry as BundleEntry<SearchParameter>[]) { const resource = entry.resource as WithId<SearchParameter>; if (searchParams.includes(resource.id)) { output.push(resource); } } writeFileSync( resolve(import.meta.dirname, '../../mock/src/mocks/searchparameters.json'), JSON.stringify(output, keyReplacer, 2), 'utf8' ); } function keyReplacer(key: string, value: any): any { if (key !== '' && !/\d+/.exec(key) && !resourceTypes.includes(key) && !properties.includes(key)) { return undefined; } return value; } if (process.argv[1].endsWith('.ts')) { main(); } // or with jq: jq 'del(.text, .differential, .mapping, .snapshot.element[].mapping)' <input-file.json> function cleanStructureDefinition(sd: StructureDefinition): void { sd.text = undefined; sd.differential = undefined; sd.mapping = undefined; if (sd?.snapshot?.element) { for (const element of sd.snapshot.element) { element.mapping = undefined; } } } function buildUSCoreStructureDefinitions(inputDirectory: string, outputFilenames: string[]): void { const sds = []; for (const file of USCoreStructureDefinitionFiles) { const sd = JSON.parse(readFileSync(resolve(inputDirectory, file), 'utf8')); cleanStructureDefinition(sd); sds.push(sd); } for (const outputFilename of outputFilenames) { writeFileSync(outputFilename, JSON.stringify(sds)); } }