[build-system]
requires = ["setuptools>=61.0", "wheel"]
build-backend = "setuptools.build_meta"
[project]
name = "oakvar-mcp"
version = "0.1.0"
description = "MCP Server for OakVar - A genomic variant analysis platform"
readme = "README.md"
license = {text = "MIT"}
authors = [
{name = "Iliya Yaroshevskiy", email = "iyarosh1@binghamton.edu"}
]
keywords = ["oakvar", "mcp", "bioinformatics", "genomics", "variant-analysis", "ai"]
classifiers = [
"Development Status :: 3 - Alpha",
"Intended Audience :: Science/Research",
"Intended Audience :: Developers",
"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Topic :: Scientific/Engineering :: Bio-Informatics",
]
requires-python = ">=3.9"
dependencies = [
"mcp>=1.0.0",
"oakvar>=2.10.0",
]
[project.optional-dependencies]
dev = [
"pytest>=7.0",
"pytest-asyncio>=0.21",
]
[project.urls]
Homepage = "https://github.com/zaroganos/oakvar-mcp"
Documentation = "https://github.com/zaroganos/oakvar-mcp#readme"
Repository = "https://github.com/zaroganos/oakvar-mcp"
Issues = "https://github.com/zaroganos/oakvar-mcp/issues"
OakVar = "https://oakvar.readthedocs.io"
[project.scripts]
oakvar-mcp = "oakvar_mcp.server:run"
[tool.setuptools.packages.find]
where = ["."]
include = ["oakvar_mcp*"]
[tool.pytest.ini_options]
asyncio_mode = "auto"
testpaths = ["tests"]
