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<h1 id="cli-system-configuration">CLI: System & Configuration</h1>
<p>Commands to manage the CodeGraphContext engine itself.</p>
<h2 id="cgc-doctor"><code>cgc doctor</code></h2>
<p>Self-diagnostic tool. Runs a health check on your installation.</p>
<p><strong>Checks performed:</strong></p>
<ul>
<li>Database connectivity (Neo4j / FalkorDB).</li>
<li>Python version compatibility.</li>
<li>Required dependencies.</li>
</ul>
<p><strong>Usage:</strong>
<div class="highlight"><pre><span></span><code>cgc<span class="w"> </span>doctor
</code></pre></div></p>
<hr />
<h2 id="cgc-mcp-setup"><code>cgc mcp setup</code></h2>
<p>The interactive wizard for configuring AI clients.</p>
<p><strong>What it does:</strong></p>
<ol>
<li>Detects installed AI Clients (Cursor, VS Code, Claude).</li>
<li>Creates the necessary config files (e.g., <code>mcp.json</code>).</li>
<li>Generates a <code>.env</code> file with database credentials.</li>
</ol>
<p><strong>Usage:</strong>
<div class="highlight"><pre><span></span><code>cgc<span class="w"> </span>mcp<span class="w"> </span>setup
</code></pre></div></p>
<hr />
<h2 id="cgc-neo4j-setup"><code>cgc neo4j setup</code></h2>
<p>The interactive wizard for configuring the graph database backend.</p>
<p><strong>What it does:</strong></p>
<ul>
<li><strong>Docker:</strong> Pulls and runs the official Neo4j image.</li>
<li><strong>Local:</strong> Helps locate a local installation.</li>
<li><strong>Remote:</strong> Configures credentials for AuraDB.</li>
</ul>
<p><strong>Usage:</strong>
<div class="highlight"><pre><span></span><code>cgc<span class="w"> </span>neo4j<span class="w"> </span>setup
</code></pre></div></p>
<hr />
<h2 id="cgc-config-commands"><code>cgc config</code> Commands</h2>
<p>Directly modify settings without editing text files.</p>
<ul>
<li><code>cgc config show</code>: Print current configuration.</li>
<li><code>cgc config set <key> <value></code>: Update a setting.<ul>
<li>Example: <code>cgc config set DEFAULT_DATABASE neo4j</code></li>
</ul>
</li>
<li><code>cgc config db <backend></code>: Switch backends (shortcut).<ul>
<li>Example: <code>cgc config db falkordb</code></li>
</ul>
</li>
</ul>
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