MGnify MCP Server

from pydantic import BaseModel, Field from typing import Optional, List class StudySearchParams(BaseModel): query: Optional[str] = Field(None, description="Free text query") biome: Optional[str] = Field(None, description="Biome ID or prefix") page: int = Field(1, ge=1) size: int = Field(25, ge=1, le=200) class RunId(BaseModel): id: str = Field(..., description="MGnify run accession, e.g. ERR1234567") class AnalysesParams(BaseModel): study_id: str type: Optional[str] = Field(None, description="analysis type filter") page: int = Field(1, ge=1) size: int = Field(25, ge=1, le=200)