STRING-db MCP Server

MIT License

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get_functional_enrichment

Identify biological functions and pathways enriched in a set of proteins using functional enrichment analysis. Supports custom species and background protein sets for precise results via STRING-db MCP Server.

Instructions

Perform functional enrichment analysis on a set of proteins

Input Schema

Name	Required	Description
`background_string_identifiers`	No	Background protein set for enrichment (optional)
`protein_ids`	Yes	List of protein identifiers
`species`	No	Species name or NCBI taxonomy ID (default: 9606 for human)

Input Schema (JSON Schema)

{
  "properties": {
    "background_string_identifiers": {
      "description": "Background protein set for enrichment (optional)",
      "items": {
        "type": "string"
      },
      "type": "array"
    },
    "protein_ids": {
      "description": "List of protein identifiers",
      "items": {
        "type": "string"
      },
      "type": "array"
    },
    "species": {
      "description": "Species name or NCBI taxonomy ID (default: 9606 for human)",
      "type": "string"
    }
  },
  "required": [
    "protein_ids"
  ],
  "type": "object"
}

Install Server

HTTP connection URL

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