"Using Local MySQL Data for Search and Chat Functionality" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceAncestry on G25 and raw DNA: nMonte fits, PCAs, GEDmatch-style and G25 calculators, qpAdm models.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
ACMG/AMP germline variant classification, gene profiles, disease associations and literature.
Sovereign intelligence dossiers, daily briefings, RAG search, knowledge graph, codon optimizer.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Run protein folding, docking, design and sequence analysis tools, and read their results.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
NCI Thesaurus concepts and the other cancer-research vocabularies served by NCI Enterprise…
Biomedical data: compounds, drug info, and molecular targets
Resolve WoRMS marine species names; fetch classifications, synonyms, distributions, traits, and IDs.
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…
Search InterPro entries, map domains onto proteins and PDB structures, and scan raw sequences.
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
BOLD Systems (Barcode of Life Data System, University of Guelph) — the global DNA barcode…
Protein research over UniProtKB: search by function, fetch curated records, map IDs, proteomes.
Find pharmacogenomics guidelines, translate diplotypes, and retrieve prescribing recommendations.
CATNAP (Compile, Analyze, and Tally Neutralizing Antibody Panels) + the LANL HIV Molecular…
UCSC Genome Browser REST API — reference genome assemblies for ~250 species, the annotation tracks…
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository. Keyless. Wraps the public…
Gene expression experiments and the brain structure ontology from the Allen Institute's Brain…
PubTator 3 MCP — biomedical entity search, literature search with entity
