"Tools or methods for generating graphs from structured data" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Diagnoses, drugs & lab codes: ICD-11, LOINC, RxNorm, MeSH, ATC, CID-10. 33 tools, MIT.
Official STRING database MCP server. Query for protein-protein interactions, enrichment, annotations, homology, and PPI networks.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Run protein folding, docking, design and sequence analysis tools, and read their results.
Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
Biomedical data: compounds, drug info, and molecular targets
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
PK serum simulation, reconstitution math and compound data for agents. Paid tools $0.01 via x402.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Biotech rNPV/PoS engine for AI agents. Signed exports, evidence register, asset landscape.
Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.
PDBe (Protein Data Bank in Europe, EBI) MCP.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.
BOLD Systems (Barcode of Life Data System, University of Guelph) — the global DNA barcode…
Gene expression experiments and the brain structure ontology from the Allen Institute's Brain…
