"Methods to Extract Data from Files" matching MCP connectors:

PDBe (Protein Data Bank in Europe, EBI) MCP.

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

Biomedical data: compounds, drug info, and molecular targets

NCI Genomic Data Commons (GDC) MCP.

A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.

Gencove consumer genomics: profile, kit status, ancestry, PRS, raw data. Requires Gencove auth.