"AI coding assistant with visual UI interaction, GitHub integration, and adaptive agent system" matching MCP connectors:
Matching Connector Tools:
Helena Bioinformatics MCP for clinical variant interpretation, ACMG/AMP evidence and literature.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Search and resolve Naturepedia, Robbie's Razor, and GC-MRD-v2.0 canonical resources.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
STRING protein-protein interaction networks across ~12k organisms
Hosted DNA language models: promoter, splice, enhancer, chromatin, expression, annotation
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.
Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer
Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.
Biomedical data: compounds, drug info, and molecular targets
Biotech rNPV/PoS engine for AI agents. Signed exports, evidence register, asset landscape.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Chemical molecular intelligence platform covering compound search, structure analysis, physicochemical property retrieval, and molecular interaction profiling.
PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.
Protein analysis: ESM-2/ESMC embeddings, mutation scoring, landscape scans, ESMFold structure.
AI orchestration for computational chemistry and HPC workflows.