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Biostudies

by io.github.pipeworx-io

Ask Pipeworx Beta

ask_pipeworx_beta
Read-onlyIdempotent

Beta version of ask_pipeworx: identical universal router (same 5,743 tools, same arguments, same response shape) with candidate routing improvements enabled live whenever one is under test. No candidate is active right now (the last was retired on outcome evidence 2026-07-26), so this currently matches ask_pipeworx exactly. Use it exactly like ask_pipeworx when you want the newest routing; results are compared against the stable router to decide what merges. Falls back to nothing — this IS a full working router, just the experimental edge.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
qNoAlias for question.
textNoAlias for question.
inputNoAlias for question.
queryNoAlias for question.
promptNoAlias for question.
questionYesYour question or request in natural language. Accepts query, q, prompt, text, input as aliases.

TDQS

A4.5/5.0
Behavior5/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already establish read-only, open-world, idempotent, non-destructive behavior. The description adds meaningful behavioral context: candidate improvements are evaluated live, none are active as of the stated date, and the tool falls back to nothing and is a full router, not a degraded stub.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is front-loaded with the core identity and scope, then adds the current-state and usage context in a compact paragraph. No sentence is wasted, and the level of detail matches the tool's experimental complexity.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a router with no output schema, the description supplies the essential operational context: current active-candidate status, parity with the stable router, the comparison purpose, and the absence of a fallback. An agent has enough information to choose and invoke it correctly.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100%, with every parameter documented as an alias or as the natural-language question field. The description does not need to repeat parameter details and adds only that the arguments are identical to ask_pipeworx; this meets the baseline but adds no additional semantic value.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

Description clearly identifies ask_pipeworx_beta as the experimental beta variant of ask_pipeworx: a functional universal router with identical arguments and response shape, differing only in enabling candidate routing improvements. This distinguishes it from the sibling stable router and ask_pipeworx_grounded.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

It explicitly instructs to use the tool exactly like ask_pipeworx when wanting the newest routing, giving clear context. It does not spell out a when-not-to-use condition (e.g., 'use ask_pipeworx for stable behavior'), though that is strongly implied.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

A3.8/5.0
Disambiguation2/5

Several tools occupy nearly identical roles: ask_pipeworx and ask_pipeworx_beta are described as functionally identical right now, ask_pipeworx_grounded and deep_research are overlapping query modes, and ai_visibility_check / scan_competitor_ai_presence / discover_tools / suggest_questions all blur into discovery or visibility tasks. The two actual BioStudies tools are clear, but they are buried in a server dominated by Pipeworx meta-tools.

Naming Consistency3/5

All tool names use snake_case, and many follow a verb_noun shape such as search_studies, get_study, and discover_tools. However, the convention is inconsistent across the set: noun-first names like entity_profile and polymarket_edges, brand-prefixed names like pipeworx_feedback, and verb-first product names like ask_pipeworx all coexist, making the pattern harder to predict.

Tool Count2/5

33 tools is well into the too-many range, and the count is especially inappropriate for a server named Biostudies since only search_studies and get_study actually belong to that domain. The rest form a sprawling general-purpose data-research platform that appears to have been merged into one server without a clear scope.

Completeness3/5

For the BioStudies-specific surface, search_studies and get_study provide reasonable read-only coverage for the EBI archive. But as the broader research platform the other 31 tools imply, the set is hard to evaluate for completeness because most actual data access is delegated to Pipeworx's hidden 5,718 tools rather than exposed directly, leaving notable gaps in transparency and direct source-level control.

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