Biomodels Search
biomodels_searchSearch BioModels for published, executable mathematical models of biological systems — metabolic pathways, signalling cascades, cell-cycle and circadian oscillators, whole-cell metabolic reconstructions, infectious-disease models. AUTHORITATIVE for "is there a published computational model of X I can actually run", which web search answers with papers rather than with loadable SBML. Returns model id, name, format, submitter and date, plus facet counts (curation status, modelling approach, and cross-referenced taxonomy/GO/UniProt/ChEBI terms) that show how the matching models break down. Search accepts pathway names, diseases, organisms, genes, proteins and author names.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Maximum models to return, 1-100 (default 10). | |
| query | Yes | Free-text query: a pathway ("glycolysis"), process ("circadian"), disease, organism, gene/protein, or author surname. | |
| offset | No | Row offset for paging; add the previous limit to page forward. |