CRISPR sgRNA / FASTA / HL7 / manifest QC
sgrna_qcHeuristic QC for CRISPR guide RNAs (GC%, PAM for SpCas9/SaCas9/Cas12a, poly-T, homopolymers, seed checks), FASTA sequences (GC%, candidate SpCas9 sites), HL7 v2 headers or sample manifests (chain of custody, PHI). Not a substitute for genome-wide off-target search.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| input | Yes | Guides (one per line), FASTA, HL7 message or CSV | |
| nuclease | No |